DBTMEE:2019217
| Gene | Sf3b1 |
| Synonyms | Prp10
SAP155
SF3b155
Targ4 |
| Description | splicing factor 3b, subunit 1 |
| Locus | NM_031179 UCSC: chr1:55042013-55084322(-) OLP: chr1:55042013-55084322(-)
|
| DB links |
Entrez 81898
MGI 1932339
Ensembl ENSMUSG00000025982
|
| Feature | protein-coding |
| GO_BP |
-
 5 Terms
|
| GO_MF |
-
3 Terms
|
| GO_CC |
-
5 Terms
|
| KEGG |
-
1 Terms
|
| Ver2_FPKM |
| DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | ESC_FPKM | MEF_FPKM | p1C_FPKM | p4C_FPKM | iPSC_FPKM |
|---|
2019217
(v2.0) | Sf3b1 | NM_031179 | 81898
| 20.4659 | 89.2759 | 160.392 | 147.654 | 220.816 | 67.1284 | 52.347 | 101.483 | 209.371 | 63.9604 |
|
| SPR_Histone_Erkek_5KaroundTSS |
| DBTMEE | Gene | Entrez | H3.3_1_ChIP/Input | H3.3_1(Enrich; log2) | H3.3_2_ChIP/Input | H3.3_2(Enrich; log2) | H3K4me3_1_ChIP/Input | H3K4me3_1(Enrich; log2) | H3K4me3_2_ChIP/Input | H3K4me3_2(Enrich; log2) | H3K27me3_1_ChIP/Input | H3K27me3_1(Enrich; log2) | H3K27me3_2_ChIP/Input | H3K27me3_2(Enrich; log2) |
|---|
2019217
(v2.0) | Sf3b1 | 81898
| 641/364 | 0.3028 | 441/364 | 0.1602 | 609/364 | 4.2986 | 1872/364 | 3.6847 | 14/364 | -2.5595 | 132/364 | -2.0502 |
|
| SPR_Histone_Erkek_2KaroundTSS |
| DBTMEE | Gene | Entrez | H3.3_1_ChIP/Input | H3.3_1(Enrich; log2) | H3.3_2_ChIP/Input | H3.3_2(Enrich; log2) | H3K4me3_1_ChIP/Input | H3K4me3_1(Enrich; log2) | H3K4me3_2_ChIP/Input | H3K4me3_2(Enrich; log2) | H3K27me3_1_ChIP/Input | H3K27me3_1(Enrich; log2) | H3K27me3_2_ChIP/Input | H3K27me3_2(Enrich; log2) |
|---|
2019217
(v2.0) | Sf3b1 | 81898
| 356/160 | 0.6378 | 247/160 | 0.5076 | 577/160 | 5.3486 | 1700/160 | 4.719 | 3/160 | -3.3012 | 40/160 | -2.5547 |
|
| SPR_Methy_Kobayashi_5KaroundTSS |
| DBTMEE | Gene | Entrez | Total_mC_levels | Number_of_mCs | Averaged_Methylation_level |
|---|
2019217
(v2.0) | Sf3b1 | 81898
| 48.9048 | 138 | 35.44 |
|
| SPR_Methy_Kobayashi_2KaroundTSS |
| DBTMEE | Gene | Entrez | Total_mC_levels | Number_of_mCs | Averaged_Methylation_level |
|---|
2019217
(v2.0) | Sf3b1 | 81898
| 22.4923 | 109 | 20.64 |
|
| SOLiD_OocyteTo4C_FPKM_gene_guided |
N/A |
| SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
N/A |
| SOLiD_Partheno1C_FPKM_gene_guided |
N/A |
| SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
N/A |
| SOLiD_Partheno4C_FPKM_gene_guided |
N/A |
| Illumina_Oo_2C_FPKM_gene_guided |
N/A |
| SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
N/A |
| NIA60mer |
| DBTMEE | Array_Feature_Number | Oligo_Parent_Clone | Unigene | Gene | Entrez | U_Cluster | NAP_Cluster | Gene_U/NAP | TIGR | SwissProt | EST | Oo | 1C | 2C | 4C | 8C | Morula | Blastocyst |
|---|
0018676
(v1.0) | 6162 | H3019C08-5 | | Sf3b1 | 81898
| U021335 | NAP080981-1 | Sf3b1; | TC881625,TC819374,TC816777 | Q99NB9 | U,F,2 | 3.6403 | 3.5223 | 3.6857 | 3.6772 | 3.0954 | 3.3696 | 3.1608 |
0018676
(v1.0) | 17246 | K0545F04-3 | Mm.28150 | Sf3b1 | 81898
| U021335 | NAP031522-1 | Sf3b1; | TC819377,TC819374 | Q99NB9 | U,F,2 | 2.028 | 2.0069 | 2.3194 | 1.8981 | 2.1127 | 2.0919 | 2.1386 |
0018676
(v1.0) | 19534 | L0278B02-3 | Mm.28150 | Sf3b1 | 81898
| U021335 | NAP092929-001 | Sf3b1; | TC819376,TC819374 | Q99NB9 | U,F,2 | 4.6056 | 4.5713 | 4.2595 | 4.4815 | 3.9305 | 4.3104 | 4.0799 |
0018676
(v1.0) | 21504 | L0857D03-3 | Mm.28150 | Sf3b1 | 81898
| U021335 | NAP092929-001 | Sf3b1; | TC881625,TC819374 | Q99NB9 | U,F,2 | 3.0918 | 2.9307 | 1.9837 | 2.3495 | 2.6479 | 2.507 | 2.3109 |
|
| MOE430 |
N/A |
| Agilent44K |
N/A |
| Proteome |
N/A |
