DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2019277
GeneSh2d3c
SynonymsCas/HEF1-associated signal transducer
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Nsp3
SH2-containing Eph receptor-binding protein 1
Shep1
DescriptionSH2 domain containing 3C
LocusNM_013781 UCSC: chr2:32576575-32610527(+) OLP: chr2:32576575-32610527(+)
NR_045535 UCSC: chr2:32576575-32610527(+) OLP: chr2:32576575-32610527(+)
NM_001252547 UCSC: chr2:32583209-32610527(+) OLP: chr2:32583209-32610527(+)
DB links


Entrez 27387
MGI 1351631
Ensembl ENSMUSG00000059013
Vega OTTMUSG00000012530
Featureprotein-coding
GO_BP
  •   4 Terms
      signal transduction (GO:0007165)
      transmembrane receptor protein tyrosine kinase signaling pathway (GO:0007169)
      small GTPase mediated signal transduction (GO:0007264)
      positive regulation of signal transduction (GO:0009967)
GO_MF
  •   2 Terms
      transmembrane receptor protein tyrosine kinase adaptor activity (GO:0005068)
      guanyl-nucleotide exchange factor activity (GO:0005085)
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2019277
(v2.0)		Sh2d3cNM_001252547,NM_013781,NR_04553527387
9.986621.42923.173119.83685.88623.014690.39427835.11468.827581.95514
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2019277
(v2.0)		Sh2d3c27387
608/534-0.3249292/534-0.9844112/5341.3281332/5340.643257/534-1.1561559/534-0.5321
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2019277
(v2.0)		Sh2d3c27387
297/247-0.2458139/247-0.940299/2472.2274306/2471.630428/247-1.0567306/247-0.289
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2019277
(v2.0)		Sh2d3c27387
112.08912688.96
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2019277
(v2.0)		Sh2d3c27387
49.62035590.22
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A