DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2022038
GeneTrp53bp1
Synonyms53BP1
p53BP1
Descriptiontransformation related protein 53 binding protein 1
LocusNM_001290830 UCSC: chr2:121020571-121097143(-) OLP: chr2:121020571-121097143(-)
NM_013735 UCSC: chr2:121020571-121097143(-) OLP: chr2:121020571-121097143(-)
DB links


Entrez 27223
MGI 1351320
Ensembl ENSMUSG00000043909
Vega OTTMUSG00000015973
Featureprotein-coding
GO_BP
  •   6 Terms
      DNA repair (GO:0006281)
      transcription, DNA-templated (GO:0006351)
      regulation of transcription, DNA-templated (GO:0006355)
      transcription from RNA polymerase II promoter (GO:0006366)
      cellular response to DNA damage stimulus (GO:0006974)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
GO_MF
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2022038
(v2.0)		Trp53bp1NM_001290830,NM_01373527223
4.797961.033553.599526.389429.26788.2213810.516864.542226.26416.80096
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2022038
(v2.0)		Trp53bp127223
696/4150.2326520/4150.2087218/4152.6373690/4152.0581129/4150.3688658/4150.0655
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2022038
(v2.0)		Trp53bp127223
341/1570.6031234/1570.4571204/1573.8785666/1573.395328/157-0.4166104/157-1.1818
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2022038
(v2.0)		Trp53bp127223
55.854111050.78
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2022038
(v2.0)		Trp53bp127223
20.79257129.29
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0021410
(v1.0)		2088C0289G10-3Mm.25231Trp53bp127223
U002345NAP097509-0014932441P04Rik;Trp53bp1;TC825890P70399U,F,22.96722.88253.00622.86792.99232.91613.0076
0021410
(v1.0)		6418H3024H02-3Mm.25231Trp53bp127223
U023259NAP073299-1Trp53bp1;TC871513,TC814980P70399U,F,23.9193.66683.40123.68463.06273.08573.1064
MOE430 N/A
Agilent44K N/A
Proteome N/A