DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2022537
GeneUsf1
SynonymsbHLHb11
upstream stimulatory factor
Descriptionupstream transcription factor 1
LocusNM_009480 UCSC: chr1:173341812-173348873(+) OLP: chr1:173341812-173348873(+)
DB links


Entrez 22278
MGI 99542
Ensembl ENSMUSG00000026641
Vega OTTMUSG00000030990
Featureprotein-coding
GO_BP
  •   12 Terms
      positive regulation of transcription from RNA polymerase II promoter by glucose (GO:0000432)
      response to hypoxia (GO:0001666)
      glucose metabolic process (GO:0006006)
      transcription, DNA-templated (GO:0006351)
      regulation of transcription, DNA-templated (GO:0006355)
      transcription from RNA polymerase II promoter (GO:0006366)
      response to UV (GO:0009411)
      late viral transcription (GO:0019086)
      cellular response to insulin stimulus (GO:0032869)
      positive regulation of transcription, DNA-templated (GO:0045893)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
      lipid homeostasis (GO:0055088)
GO_MF
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2022537
(v2.0)		Usf1NM_00948022278
22.740538.455541.488889.96460.654136.389216.333252.218678.257345.5486
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2022537
(v2.0)		Usf122278
732/4770.1048416/477-0.312973/4770.8764326/4770.77946/477-1.298492/477-0.5533
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2022537
(v2.0)		Usf122278
300/1630.3653177/1630.002764/1632.1711289/1632.14046/163-2.5299/163-1.3056
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2022537
(v2.0)		Usf122278
73.357115447.63
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2022537
(v2.0)		Usf122278
6.7005788.59
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0021894
(v1.0)		3321C0637H03-3Mm.8Usf122278
Usf12.53072.64492.47592.51992.97012.73312.9179
MOE430 N/A
Agilent44K N/A
Proteome N/A