DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2022656
GeneVcp
SynonymsAAA ATPase p97
CDC48
p97
p97/VCP
Descriptionvalosin containing protein
LocusNM_009503 UCSC: chr4:42992836-43013379(-) OLP: chr4:42992836-43013379(-)
DB links


Entrez 269523
MGI 99919
Ensembl ENSMUSG00000028452
Vega OTTMUSG00000006688
Featureprotein-coding
GO_BP
  •   19 Terms
      ATP catabolic process (GO:0006200)
      DNA repair (GO:0006281)
      double-strand break repair (GO:0006302)
      ubiquitin-dependent protein catabolic process (GO:0006511)
      transport (GO:0006810)
      ER to Golgi vesicle-mediated transport (GO:0006888)
      activation of cysteine-type endopeptidase activity involved in apoptotic process (GO:0006919)
      cellular response to DNA damage stimulus (GO:0006974)
      protein ubiquitination (GO:0016567)
      protein N-linked glycosylation via asparagine (GO:0018279)
      translesion synthesis (GO:0019985)
      ER-associated ubiquitin-dependent protein catabolic process (GO:0030433)
      retrograde protein transport, ER to cytosol (GO:0030970)
      positive regulation of protein complex assembly (GO:0031334)
      positive regulation of proteasomal ubiquitin-dependent protein catabolic process (GO:0032436)
      protein hexamerization (GO:0034214)
      positive regulation of protein catabolic process (GO:0045732)
      protein homooligomerization (GO:0051260)
      aggresome assembly (GO:0070842)
GO_MF
GO_CC
KEGG
  •   1 Terms
      Protein processing in endoplasmic reticulum (mmu04141)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2022656
(v2.0)		VcpNM_009503269523
115.90843.991319.469660.9686178.999119.17196.77521.3423174.675126.916
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2022656
(v2.0)		Vcp269523
615/4010.1039372/401-0.2239170/4012.3285389/4011.28217/401-3.604691/401-2.7188
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2022656
(v2.0)		Vcp269523
263/1710.1076146/171-0.342159/1713.4062327/1712.24992/171-3.809840/171-2.6501
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2022656
(v2.0)		Vcp269523
56.551711748.33
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2022656
(v2.0)		Vcp269523
8.65956413.53
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0022010
(v1.0)		18641L0218H01-3Mm.18921Vcp22331
U024980NAP120841-001Tera, VcpTC896983,TC896979,TC896971Q01853U,F,23.48643.25233.72664.43914.01484.37554.1826
MOE430 N/A
Agilent44K N/A
Proteome N/A