DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2002309
GeneAlkbh5
SynonymsAbh5
Ofoxd
DescriptionalkB, alkylation repair homolog 5 (E. coli)
LocusNM_172943 UCSC: chr11:60351185-60372014(+) OLP: chr11:60351185-60372014(+)
DB links


Entrez 268420
MGI 2144489
Ensembl ENSMUSG00000042650
Vega OTTMUSG00000007765
Featureprotein-coding
GO_BP
GO_MF
  •   13 Terms
      sulfonate dioxygenase activity (GO:0000907)
      oxidoreductase activity (GO:0016491)
      oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors (GO:0016706)
      2,4-dichlorophenoxyacetate alpha-ketoglutarate dioxygenase activity (GO:0018602)
      procollagen-proline dioxygenase activity (GO:0019798)
      hypophosphite dioxygenase activity (GO:0034792)
      oxidative RNA demethylase activity (GO:0035515)
      DNA-N1-methyladenine dioxygenase activity (GO:0043734)
      poly(A) RNA binding (GO:0044822)
      metal ion binding (GO:0046872)
      dioxygenase activity (GO:0051213)
      C-19 gibberellin 2-beta-dioxygenase activity (GO:0052634)
      C-20 gibberellin 2-beta-dioxygenase activity (GO:0052635)
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002309
(v2.0)		Alkbh5NM_172943268420
20.1793114.481116.4330.168513.141415.501419.0352146.29813.694814.7708
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2002309
(v2.0)		Alkbh5268420
900/4410.5153483/4410.015319/4413.0992751/4412.09369/441-0.6111662/441-0.0133
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2002309
(v2.0)		Alkbh5268420
560/1990.9763242/1990.1653307/1994.1458661/1993.047216/199-1.5212139/199-1.1086
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2002309
(v2.0)		Alkbh5268420
46.538120522.7
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2002309
(v2.0)		Alkbh5268420
14.06811688.37
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A