DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2002966
GeneAtp5c1
SynonymsF1 gamma
DescriptionATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1
LocusNM_001112738 UCSC: chr2:9977659-10002137(-) OLP: chr2:9977659-10002137(-)
NM_020615 UCSC: chr2:9977659-10002137(-) OLP: chr2:9977659-10002137(-)
DB links


Entrez 11949
MGI 1261437
Ensembl ENSMUSG00000025781
Vega OTTMUSG00000011013
Featureprotein-coding
GO_BP
GO_MF
  •   4 Terms
      ATPase activity (GO:0016887)
      poly(A) RNA binding (GO:0044822)
      proton-transporting ATP synthase activity, rotational mechanism (GO:0046933)
      proton-transporting ATPase activity, rotational mechanism (GO:0046961)
GO_CC
  •   7 Terms
      mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) (GO:0000275)
      mitochondrion (GO:0005739)
      mitochondrial inner membrane (GO:0005743)
      mitochondrial proton-transporting ATP synthase complex (GO:0005753)
      membrane (GO:0016020)
      proton-transporting ATP synthase complex, catalytic core F(1) (GO:0045261)
      extracellular vesicular exosome (GO:0070062)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002966
(v2.0)		Atp5c1NM_001112738,NM_02061511949
115.67240.418122.04590.0634147.198151.115165.76717.0806143.168170.883
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2002966
(v2.0)		Atp5c111949
679/4120.2075440/412-0.0213195/4122.4874370/4121.171314/412-2.736390/412-2.7734
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2002966
(v2.0)		Atp5c111949
357/1710.5465192/1710.0506183/1713.6079349/1712.343610/171-1.935342/171-2.5822
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2002966
(v2.0)		Atp5c111949
69.323914448.14
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2002966
(v2.0)		Atp5c111949
17.67188820.08
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0003061
(v1.0)		11466H3115H10-3Mm.12677Atp5c111949
Atp5c12.92473.163.24563.48842.98273.30063.2761
MOE430 N/A
Agilent44K N/A
Proteome N/A