DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2003026
GeneAtrx
SynonymsDXHXS6677E
HP1-BP38
Hp1bp2
Rad54
XH2
Xnp
Descriptionalpha thalassemia/mental retardation syndrome X-linked homolog (human)
LocusNM_009530 UCSC: chrX:102992956-103124711(-) OLP: chrX:102992956-103124711(-)
DB links


Entrez 22589
MGI 103067
Ensembl ENSMUSG00000031229
Vega OTTMUSG00000018268
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003026
(v2.0)		AtrxNM_00953022589
7.0238565.113172.068451.538545.707526.858424.663241.210559.959524.6642
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2003026
(v2.0)		Atrx22589
396/2070.4213258/2070.2006136/2072.9234483/2072.539230/207-0.7102211/207-0.5684
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2003026
(v2.0)		Atrx22589
197/910.5961132/910.4164126/913.9014396/913.417111/91-0.929672/91-0.9229
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2003026
(v2.0)		Atrx22589
29.35838733.75
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2003026
(v2.0)		Atrx22589
7.15834914.61
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0003122
(v1.0)		4865G0110B04-3Mm.10141Atrx22589
U039624NAP109077-1Atrx;Xnp;TC892138Q61687U,F,23.18743.03212.66662.79422.6942.80522.7804
0003122
(v1.0)		6331H3023B10-3Atrx22589
U039624NAP000535-002Atrx;Xnp;TC892140,TC892138Q61687U,F,23.12.92652.76432.87132.57672.77932.8065
0003122
(v1.0)		10685H3102B08-3Mm.10141Atrx22589
TC8921403.39933.34923.09633.17143.19783.17713.1734
0003122
(v1.0)		11053H3107F11-3Mm.10141Atrx22589
U033460NAP015050-001TC8921352.38772.4292.37832.38422.31592.36422.4056
0003122
(v1.0)		15014J1008A07-3Mm.10141Atrx22589
U033460NAP015050-001TC8921352.36062.31222.39012.38382.27762.37732.4172
0003122
(v1.0)		18581L0215H10-3Mm.141130ATRXU039624NAP010064-001Atrx;Xnp;Q61687U,F,23.81523.76963.21383.19883.40683.38363.4563
MOE430 N/A
Agilent44K N/A
Proteome N/A