DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2004534
GeneChchd3
Synonyms
Descriptioncoiled-coil-helix-coiled-coil-helix domain containing 3
LocusNM_025336 UCSC: chr6:32742227-33010152(-) OLP: chr6:32742227-33010152(-)
DB links


Entrez 66075
MGI 1913325
Ensembl ENSMUSG00000053768
Vega OTTMUSG00000014758
Featureprotein-coding
GO_BP
  •   6 Terms
      negative regulation of transcription from RNA polymerase II promoter (GO:0000122)
      transcription, DNA-templated (GO:0006351)
      regulation of transcription, DNA-templated (GO:0006355)
      transcription from RNA polymerase II promoter (GO:0006366)
      inner mitochondrial membrane organization (GO:0007007)
      mitochondrial fusion (GO:0008053)
GO_MF
  •   4 Terms
      RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription (GO:0001227)
      protein binding (GO:0005515)
      phosphatase binding (GO:0019902)
      protein complex scaffold (GO:0032947)
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004534
(v2.0)		Chchd3NM_02533666075
34.641232.462352.86415.110313.9353.721642.920242.77515.885959.7396
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2004534
(v2.0)		Chchd366075
593/437-0.0722412/437-0.200754/4370.5714125/437-0.471296/437-0.1275622/437-0.0899
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2004534
(v2.0)		Chchd366075
263/1830.0103179/183-0.147250/1831.6652108/1830.564110/183-2.030974/183-1.8842
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2004534
(v2.0)		Chchd366075
63.266312152.29
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2004534
(v2.0)		Chchd366075
22.41727729.11
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A