DBTMEE:2006066
| Gene | Dnajb6 |
| Synonyms | mDj4
Mrj |
| Description | DnaJ (Hsp40) homolog, subfamily B, member 6 |
| Locus | NM_011847 UCSC: chr5:30062438-30093641(+) OLP: chr5:30062438-30093641(+)
NM_001127367 UCSC: chr5:30062438-30093641(+) OLP: chr5:30062438-30093641(+)
NM_001037941 UCSC: chr5:30062438-30084508(+) OLP: chr5:30062438-30084508(+)
NM_001037940 UCSC: chr5:30062438-30113018(+) OLP: chr5:30062438-30113018(+)
|
| DB links |
Entrez 23950
MGI 1344381
Ensembl ENSMUSG00000029131
Vega OTTMUSG00000024721
|
| Feature | protein-coding |
| GO_BP |
-
 13 Terms
protein folding (GO:0006457)
actin cytoskeleton organization (GO:0030036)
extracellular matrix organization (GO:0030198)
positive regulation of ATPase activity (GO:0032781)
protein localization to nucleus (GO:0034504)
negative regulation of cysteine-type endopeptidase activity involved in apoptotic process (GO:0043154)
intermediate filament organization (GO:0045109)
negative regulation of transcription, DNA-templated (GO:0045892)
chorio-allantoic fusion (GO:0060710)
syncytiotrophoblast cell differentiation involved in labyrinthine layer development (GO:0060715)
chorion development (GO:0060717)
chaperone-mediated protein folding (GO:0061077)
negative regulation of inclusion body assembly (GO:0090084)
|
| GO_MF |
-
7 Terms
|
| GO_CC |
-
5 Terms
|
| KEGG | |
| Ver2_FPKM |
| DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | ESC_FPKM | MEF_FPKM | p1C_FPKM | p4C_FPKM | iPSC_FPKM |
|---|
2006066
(v2.0) | Dnajb6 | NM_001037940,NM_001037941,NM_001127367,NM_011847 | 23950
| 147.668 | 181.159 | 177.916 | 334.472 | 802.322 | 111.822 | 42.2992 | 131.522 | 641.642 | 145.959 |
|
| SPR_Histone_Erkek_5KaroundTSS |
| DBTMEE | Gene | Entrez | H3.3_1_ChIP/Input | H3.3_1(Enrich; log2) | H3.3_2_ChIP/Input | H3.3_2(Enrich; log2) | H3K4me3_1_ChIP/Input | H3K4me3_1(Enrich; log2) | H3K4me3_2_ChIP/Input | H3K4me3_2(Enrich; log2) | H3K27me3_1_ChIP/Input | H3K27me3_1(Enrich; log2) | H3K27me3_2_ChIP/Input | H3K27me3_2(Enrich; log2) |
|---|
2006066
(v2.0) | Dnajb6 | 23950
| 730/432 | 0.2435 | 526/432 | 0.1675 | 706/432 | 4.2718 | 1864/432 | 3.433 | 70/432 | -0.5612 | 528/432 | -0.309 |
|
| SPR_Histone_Erkek_2KaroundTSS |
| DBTMEE | Gene | Entrez | H3.3_1_ChIP/Input | H3.3_1(Enrich; log2) | H3.3_2_ChIP/Input | H3.3_2(Enrich; log2) | H3K4me3_1_ChIP/Input | H3K4me3_1(Enrich; log2) | H3K4me3_2_ChIP/Input | H3K4me3_2(Enrich; log2) | H3K27me3_1_ChIP/Input | H3K27me3_1(Enrich; log2) | H3K27me3_2_ChIP/Input | H3K27me3_2(Enrich; log2) |
|---|
2006066
(v2.0) | Dnajb6 | 23950
| 355/185 | 0.4255 | 273/185 | 0.4431 | 630/185 | 5.2795 | 1514/185 | 4.3455 | 6/185 | -2.6983 | 90/185 | -1.6226 |
|
| SPR_Methy_Kobayashi_5KaroundTSS |
| DBTMEE | Gene | Entrez | Total_mC_levels | Number_of_mCs | Averaged_Methylation_level |
|---|
2006066
(v2.0) | Dnajb6 | 23950
| 48.581 | 133 | 36.53 |
|
| SPR_Methy_Kobayashi_2KaroundTSS |
| DBTMEE | Gene | Entrez | Total_mC_levels | Number_of_mCs | Averaged_Methylation_level |
|---|
2006066
(v2.0) | Dnajb6 | 23950
| 22.8974 | 105 | 21.81 |
|
| SOLiD_OocyteTo4C_FPKM_gene_guided |
N/A |
| SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
N/A |
| SOLiD_Partheno1C_FPKM_gene_guided |
N/A |
| SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
N/A |
| SOLiD_Partheno4C_FPKM_gene_guided |
N/A |
| Illumina_Oo_2C_FPKM_gene_guided |
N/A |
| SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
N/A |
| NIA60mer |
| DBTMEE | Array_Feature_Number | Oligo_Parent_Clone | Unigene | Gene | Entrez | U_Cluster | NAP_Cluster | Gene_U/NAP | TIGR | SwissProt | EST | Oo | 1C | 2C | 4C | 8C | Morula | Blastocyst |
|---|
0006137
(v1.0) | 5670 | H3005A06-3 | Mm.2701 | Dnajb6 | 23950
| U005405 | NAP100890-001 | Hsp40, Dnajb6 | TC880239,TC880231 | O54946 | U,F,2 | 3.4235 | 3.6207 | 3.877 | 4.5336 | 4.3318 | 4.2919 | 4.1205 |
0006137
(v1.0) | 7468 | H3048F10-3 | Mm.2701 | Dnajb6 | 23950
| U005405 | NAP000273-003 | Dnajb6; | TC880233 | O54946 | U,F,2 | 3.7486 | 3.8098 | 3.402 | 3.3893 | 3.6754 | 3.7478 | 3.7374 |
|
| MOE430 |
N/A |
| Agilent44K |
N/A |
| Proteome |
N/A |
