DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2010060
GeneHnrnpk
SynonymshnRNPK
Hnrpk
KBBP
Descriptionheterogeneous nuclear ribonucleoprotein K
LocusNM_025279 UCSC: chr13:58493312-58503877(-) OLP: chr13:58493312-58503877(-)
DB links


Entrez 15387
MGI 99894
Ensembl ENSMUSG00000021546
Vega OTTMUSG00000035894
Featureprotein-coding
GO_BP
  •   11 Terms
      transcription, DNA-templated (GO:0006351)
      regulation of transcription, DNA-templated (GO:0006355)
      transcription from RNA polymerase II promoter (GO:0006366)
      mRNA processing (GO:0006397)
      RNA splicing (GO:0008380)
      regulation of low-density lipoprotein particle clearance (GO:0010988)
      positive regulation of low-density lipoprotein particle receptor biosynthetic process (GO:0045716)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
      positive regulation of receptor-mediated endocytosis (GO:0048260)
      regulation of lipid transport by positive regulation of transcription from RNA polymerase II promoter (GO:0072369)
      regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (GO:1902165)
GO_MF
  •   7 Terms
      RNA polymerase II core promoter proximal region sequence-specific DNA binding (GO:0000978)
      RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription (GO:0001077)
      DNA binding (GO:0003677)
      single-stranded DNA binding (GO:0003697)
      RNA binding (GO:0003723)
      protein binding (GO:0005515)
      poly(A) RNA binding (GO:0044822)
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2010060
(v2.0)		HnrnpkNM_02527915387
197.465176.053127.401211.432405.723776.227313.1190.6083314.042768.462
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2010060
(v2.0)		Hnrnpk15387
902/3580.8186595/3580.6153458/3583.91151041/3582.862512/358-2.7423124/358-2.1155
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2010060
(v2.0)		Hnrnpk15387
612/1951.1332323/1950.6093447/1954.714975/1953.63626/195-2.772785/195-1.7792
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2010060
(v2.0)		Hnrnpk15387
44.108616227.23
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2010060
(v2.0)		Hnrnpk15387
6.8521215.66
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A