DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2011577
GeneLimk1
Synonyms
DescriptionLIM-domain containing, protein kinase
LocusNM_010717 UCSC: chr5:135131909-135164460(-) OLP: chr5:135131909-135164460(-)
DB links


Entrez 16885
MGI 104572
Ensembl ENSMUSG00000029674
Vega OTTMUSG00000026202
Featureprotein-coding
GO_BP
  •   6 Terms
      protein phosphorylation (GO:0006468)
      phosphorylation (GO:0016310)
      positive regulation of actin filament bundle assembly (GO:0032233)
      positive regulation of axon extension (GO:0045773)
      negative regulation of ubiquitin-protein transferase activity (GO:0051444)
      positive regulation of stress fiber assembly (GO:0051496)
GO_MF
GO_CC
KEGG
  •   3 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2011577
(v2.0)		Limk1NM_01071716885
5.7533918.509834.16511.5156.785143.542943.7962246.6566.114654.11382
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2011577
(v2.0)		Limk116885
712/4490.152430/449-0.1782277/4492.871617/4491.7841121/4490.1646895/4490.3951
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2011577
(v2.0)		Limk116885
334/1870.3224190/187-0.0927266/1874.0242578/1872.942556/1870.312374/1870.3988
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2011577
(v2.0)		Limk116885
68.851813252.16
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2011577
(v2.0)		Limk116885
14.5547619.15
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0011637
(v1.0)		2646C0347C01-3Mm.222344Limk116885
NAP038026-1TC9393802.79692.81692.87932.84082.61722.71662.6416
0011637
(v1.0)		6140H3018E07-3Mm.218670Limk116885
NAP033974-1TC8177092.53782.6132.70162.58552.47052.50072.4044
MOE430 N/A
Agilent44K N/A
Proteome N/A