DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2016183
GenePacsin2
SynonymsSyndapin II
Descriptionprotein kinase C and casein kinase substrate in neurons 2
LocusNM_001159510 UCSC: chr15:83206037-83263280(-) OLP: chr15:83206037-83263280(-)
NM_001159509 UCSC: chr15:83206037-83295036(-) OLP: chr15:83206037-83295036(-)
NM_011862 UCSC: chr15:83206037-83263280(-) OLP: chr15:83206037-83263280(-)
DB links


Entrez 23970
MGI 1345153
Ensembl ENSMUSG00000016664
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2016183
(v2.0)		Pacsin2NM_001159509,NM_001159510,NM_01186223970
25.0747139.901175.56894.298134.486816.817625.2112148.36436.117416.2159
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2016183
(v2.0)		Pacsin223970
642/4480.0062375/448-0.3719138/4481.8741371/4481.05545/448-1.2394331/448-1.0326
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2016183
(v2.0)		Pacsin223970
330/2000.2087197/200-0.1373128/2002.8835331/2002.04449/200-2.2939119/200-1.3373
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2016183
(v2.0)		Pacsin223970
85.23569193.67
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2016183
(v2.0)		Pacsin223970
36.72323994.16
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0015716
(v1.0)		12062H3131H02-3Mm.23978Pacsin223970
U036475NAP097183-001Pacsin2;TC921482,TC910091,TC871057Q03717U,F,25.03175.10184.05984.23283.3053.65174.0971
MOE430 N/A
Agilent44K N/A
Proteome N/A