DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2016219
GenePan2
SynonymsTcf3
A1
ALF2
bHLHb21
E12
E2A
E47
Pan1
Tcfe2a
Descriptiontranscription factor 3
LocusNM_001252327 UCSC: chr10:127740391-127758414(+) OLP: chr10:127740391-127758414(+)
NM_001252326 UCSC: chr10:127740391-127758414(+) OLP: chr10:127740391-127758414(+)
NM_133992 UCSC: chr10:127740391-127758414(+) OLP: chr10:127740391-127758414(+)
DB links


Entrez 103135
MGI 1918984
Ensembl ENSMUSG00000005682
Featureprotein-coding
GO_BP
  •   4 Terms
      nuclear-transcribed mRNA poly(A) tail shortening (GO:0000289)
      nuclear-transcribed mRNA catabolic process, exonucleolytic (GO:0000291)
      mRNA processing (GO:0006397)
      RNA phosphodiester bond hydrolysis, exonucleolytic (GO:0090503)
GO_MF
GO_CC
KEGG
  •   1 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2016219
(v2.0)		Pan2NM_001252326,NM_001252327,NM_133992103135
3.4515568.5965113.0217.199313.482714.092910.036995.486711.67769.76495
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2016219
(v2.0)		Pan2103135
609/431-0.014375/431-0.3162102/4311.496221/4310.365836/431-1.4982321/431-1.021
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2016219
(v2.0)		Pan2103135
262/201-0.1298174/201-0.322594/2012.4353200/2011.31337/201-2.622858/201-2.3624
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2016219
(v2.0)		Pan2103135
83.621913561.94
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2016219
(v2.0)		Pan2103135
14.9425925.33
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A