DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2017163
GenePpfibp2
SynonymsCclp1
liprin beta 2
DescriptionPTPRF interacting protein, binding protein 2 (liprin beta 2)
LocusNM_008905 UCSC: chr7:114738565-114888410(+) OLP: chr7:114738565-114888410(+)
NM_001163557 UCSC: chr7:114750358-114892097(+) OLP: chr7:114750358-114892097(+)
DB links


Entrez 19024
MGI 894649
Ensembl ENSMUSG00000036528
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017163
(v2.0)		Ppfibp2NM_001163557,NM_00890519024
7.0314265.07276.25419.2120538.67632.47745088.321746.00922.5658
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2017163
(v2.0)		Ppfibp219024
560/491-0.3224434/491-0.293617/491-1.203837/491-2.367750/491-1.2215403/491-0.8818
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2017163
(v2.0)		Ppfibp219024
225/205-0.3764171/205-0.37576/205-1.35413/205-2.558421/205-1.1913180/205-0.7819
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2017163
(v2.0)		Ppfibp219024
66.065512353.71
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2017163
(v2.0)		Ppfibp219024
14.16246820.83
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0016673
(v1.0)		14814J0823F08-3Mm.2817Ppfibp219024
U008586NAP099430-001Ppfibp2;TC815352,TC815351O35711U,F3.01333.06532.80923.20043.34393.56263.2109
MOE430 N/A
Agilent44K N/A
Proteome N/A