DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2018072
GeneRbm38
SynonymsRnpc1
Seb4l
DescriptionRNA binding motif protein 38
LocusNM_019547 UCSC: chr2:172847403-172860232(+) OLP: chr2:172847403-172860232(+)
DB links


Entrez 56190
MGI 1889294
Ensembl ENSMUSG00000027510
Vega OTTMUSG00000016681
Featureprotein-coding
GO_BP
  •   10 Terms
      mRNA processing (GO:0006397)
      DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest (GO:0006977)
      DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator (GO:0006978)
      cell cycle (GO:0007049)
      negative regulation of cell proliferation (GO:0008285)
      RNA splicing (GO:0008380)
      regulation of myotube differentiation (GO:0010830)
      cell differentiation (GO:0030154)
      regulation of RNA splicing (GO:0043484)
      3'-UTR-mediated mRNA stabilization (GO:0070935)
GO_MF
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018072
(v2.0)		Rbm38NM_01954756190
6.28359211.767373.29646.757312.155327.84991.71619751.87724.374626.0084
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2018072
(v2.0)		Rbm3856190
850/627-0.0737433/627-0.649184/6271.8125487/6270.963933/627-2.1566348/627-1.4448
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2018072
(v2.0)		Rbm3856190
393/2230.3034181/223-0.4151125/2232.701355/2231.989917/223-1.5999163/223-1.0446
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2018072
(v2.0)		Rbm3856190
74.881118640.26
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2018072
(v2.0)		Rbm3856190
18.381710517.51
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A