DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2019340
GeneShroom2
SynonymsApxl
Shrm2
Descriptionshroom family member 2
LocusNM_172441 UCSC: chrX:149044052-149204029(-) OLP: chrX:149044052-149204029(-)
NM_001290685 UCSC: chrX:149044052-149079091(-) OLP: chrX:149044052-149079091(-)
NM_001290684 UCSC: chrX:149044052-149204029(-) OLP: chrX:149044052-149204029(-)
NM_001290686 UCSC: chrX:149044052-149079091(-) OLP: chrX:149044052-149079091(-)
NM_001290687 UCSC: chrX:149044052-149078692(-) OLP: chrX:149044052-149078692(-)
DB links


Entrez 110380
MGI 107194
Ensembl ENSMUSG00000045180
Vega OTTMUSG00000019337
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2019340
(v2.0)		Shroom2NM_001290684,NM_001290685,NM_001290686,NM_001290687,NM_172441110380
2.7194530.199153.347313.03924.494443.849160.7670855.2795.727083.24076
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2019340
(v2.0)		Shroom2110380
391/1590.7815252/1590.545349/1591.8259192/1591.588291/1591.2312715/1591.5636
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2019340
(v2.0)		Shroom2110380
243/940.8506153/940.581545/942.3949160/942.069547/941.0256421/941.5537
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2019340
(v2.0)		Shroom2110380
35.48658939.87
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2019340
(v2.0)		Shroom2110380
11.78426219.01
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A