DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2019346
GeneSiah2
SynonymsSinh2
Descriptionseven in absentia 2
LocusNM_009174 UCSC: chr3:58478871-58496310(-) OLP: chr3:58478871-58496310(-)
DB links


Entrez 20439
MGI 108062
Ensembl ENSMUSG00000036432
Vega OTTMUSG00000029497
Featureprotein-coding
GO_BP
  •   11 Terms
      ubiquitin-dependent protein catabolic process (GO:0006511)
      apoptotic process (GO:0006915)
      cell cycle (GO:0007049)
      multicellular organismal development (GO:0007275)
      protein ubiquitination (GO:0016567)
      regulation of protein ubiquitination (GO:0031396)
      negative regulation of apoptotic process (GO:0043066)
      negative regulation of cysteine-type endopeptidase activity involved in apoptotic process (GO:0043154)
      cellular protein catabolic process (GO:0044257)
      negative regulation of canonical Wnt signaling pathway (GO:0090090)
      negative regulation of extrinsic apoptotic signaling pathway (GO:2001237)
GO_MF
  •   16 Terms
      ubiquitin-protein transferase activity (GO:0004842)
      protein binding (GO:0005515)
      zinc ion binding (GO:0008270)
      UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity (GO:0008766)
      ligase activity (GO:0016874)
      ribosomal S6-glutamic acid ligase activity (GO:0018169)
      ubiquitin conjugating enzyme binding (GO:0031624)
      coenzyme F420-0 gamma-glutamyl ligase activity (GO:0043773)
      coenzyme F420-2 alpha-glutamyl ligase activity (GO:0043774)
      metal ion binding (GO:0046872)
      protein-glycine ligase activity (GO:0070735)
      protein-glycine ligase activity, initiating (GO:0070736)
      protein-glycine ligase activity, elongating (GO:0070737)
      tubulin-glycine ligase activity (GO:0070738)
      protein-glutamic acid ligase activity (GO:0070739)
      tubulin-glutamic acid ligase activity (GO:0070740)
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2019346
(v2.0)		Siah2NM_00917420439
11.0413374.754721.574232.58231.53144.907234.11332780.21840.93684.68748
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2019346
(v2.0)		Siah220439
755/4530.2237534/4530.1209389/4533.34691173/4532.697165/453-0.7344464/453-0.5632
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2019346
(v2.0)		Siah220439
396/1900.5443271/1900.3943351/1904.4013866/1903.502325/190-0.8429201/190-0.5149
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2019346
(v2.0)		Siah220439
54.777914039.13
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2019346
(v2.0)		Siah220439
10.74459111.81
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018806
(v1.0)		10205H3092E12-3Siah220439
U024081NAP009975-001Siah2;TC869100Q06986U,F,24.22164.38194.00883.90032.98793.06663.0047
MOE430 N/A
Agilent44K N/A
Proteome N/A