DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2022328
GeneUbap1
SynonymsNAG20
Descriptionubiquitin-associated protein 1
LocusNM_023305 UCSC: chr4:41296029-41336799(+) OLP: chr4:41296029-41336799(+)
NM_001290454 UCSC: chr4:41296029-41336799(+) OLP: chr4:41296029-41336799(+)
DB links


Entrez 67123
MGI 2149543
Ensembl ENSMUSG00000028437
Vega OTTMUSG00000006663
Featureprotein-coding
GO_BP
  •   3 Terms
      transport (GO:0006810)
      protein transport (GO:0015031)
      ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway (GO:0043162)
GO_MF
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2022328
(v2.0)		Ubap1NM_001290454,NM_02330567123
19.808111.794714.839756.426430.089319.44314.968815.289932.05321.1574
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2022328
(v2.0)		Ubap167123
555/3170.2943332/317-0.0493181/3172.7463402/3171.666226/317-1.5145145/317-1.7173
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2022328
(v2.0)		Ubap167123
275/1180.7031144/1180.1697176/1184.0448388/1183.021810/118-1.415546/118-1.9239
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2022328
(v2.0)		Ubap167123
44.345211538.56
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2022328
(v2.0)		Ubap167123
12.63568215.41
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0021692
(v1.0)		2280C0308G07-3Mm.29877Ubap167123
2.65292.63452.27562.36762.00782.22542.2128
0021692
(v1.0)		3963C0908E12-3Mm.29877Ubap167123
U004210NAP001111-001Ubap;Ubap1;TC851321,TC814301Q9ERV5U,F,23.54553.40283.46213.84293.79773.6633.7496
0021692
(v1.0)		5029G0119H07-3Mm.29877Ubap167123
U004210NAP093196-001Ubap;Ubap1;TC814301Q9ERV5U,F,23.70613.62243.41823.5073.66553.53323.7477
MOE430 N/A
Agilent44K N/A
Proteome N/A