DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:2023107

Gene

Wars

Synonyms

Description

tryptophanyl-tRNA synthetase

Locus

NM_011710 UCSC: chr12:110098240-110131421(-) OLP: chr12:110098240-110131421(-)
NM_001164314 UCSC: chr12:110098240-110132384(-) OLP: chr12:110098240-110132384(-)
NM_001164488 UCSC: chr12:110098240-110131408(-) OLP: chr12:110098240-110131408(-)

DB links

Entrez 22375
MGI 104630
Ensembl ENSMUSG00000021266
Vega OTTMUSG00000034952

Feature

protein-coding

GO_BP

5 Terms

GO_MF

5 Terms

GO_CC

3 Terms

KEGG

2 Terms

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	ESC_FPKM	MEF_FPKM	p1C_FPKM	p4C_FPKM	iPSC_FPKM
2023107 (v2.0)	Wars	NM_001164314,NM_001164488,NM_011710	22375	163.317	43.1818	40.7364	20.8496	31.5531	18.1836	19.8077	51.8642	29.5643	17.4861

SPR_Histone_Erkek_5KaroundTSS

DBTMEE	Gene	Entrez	H3.3_1_ChIP/Input	H3.3_1(Enrich; log2)	H3.3_2_ChIP/Input	H3.3_2(Enrich; log2)	H3K4me3_1_ChIP/Input	H3K4me3_1(Enrich; log2)	H3K4me3_2_ChIP/Input	H3K4me3_2(Enrich; log2)	H3K27me3_1_ChIP/Input	H3K27me3_1(Enrich; log2)	H3K27me3_2_ChIP/Input	H3K27me3_2(Enrich; log2)
2023107 (v2.0)	Wars	22375	692/472	0.0391	474/472	-0.1099	248/472	2.6418	708/472	1.9106	15/472	-2.8375	134/472	-2.4027

SPR_Histone_Erkek_2KaroundTSS

DBTMEE	Gene	Entrez	H3.3_1_ChIP/Input	H3.3_1(Enrich; log2)	H3.3_2_ChIP/Input	H3.3_2(Enrich; log2)	H3K4me3_1_ChIP/Input	H3K4me3_1(Enrich; log2)	H3K4me3_2_ChIP/Input	H3K4me3_2(Enrich; log2)	H3K27me3_1_ChIP/Input	H3K27me3_1(Enrich; log2)	H3K27me3_2_ChIP/Input	H3K27me3_2(Enrich; log2)
2023107 (v2.0)	Wars	22375	328/196	0.2289	222/196	0.0632	214/196	3.6479	579/196	2.8781	9/196	-2.2653	56/196	-2.3755

SPR_Methy_Kobayashi_5KaroundTSS

DBTMEE	Gene	Entrez	Total_mC_levels	Number_of_mCs	Averaged_Methylation_level
2023107 (v2.0)	Wars	22375	92.9202	157	59.18

SPR_Methy_Kobayashi_2KaroundTSS

DBTMEE	Gene	Entrez	Total_mC_levels	Number_of_mCs	Averaged_Methylation_level
2023107 (v2.0)	Wars	22375	21.2296	82	25.89

SOLiD_OocyteTo4C_FPKM_gene_guided

N/A

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

N/A

SOLiD_Partheno1C_FPKM_gene_guided

N/A

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

N/A

SOLiD_Partheno4C_FPKM_gene_guided

N/A

Illumina_Oo_2C_FPKM_gene_guided

N/A

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

N/A

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0022456 (v1.0)	1228	C0188H11-3	Mm.38433	Wars	22375	U034345	NAP096747-001	Wars;	TC937287,TC880384,TC880381,TC880380	P32921	U,F	4.2492	4.1232	3.5944	3.8133	3.7048	3.9009	3.9985

N/A

N/A

N/A