DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:2001119

Gene

4931406C07Rik

Synonyms

Description

RIKEN cDNA 4931406C07 gene

Locus

NM_133732 UCSC: chr9:15087781-15106051(-) OLP: chr9:15087781-15106051(-)
NM_001199485 UCSC: chr9:15087781-15110611(-) OLP: chr9:15087781-15110611(-)
NM_001199484 UCSC: chr9:15087781-15110892(-) OLP: chr9:15087781-15110892(-)

DB links

Entrez 70984
MGI 1918234
Ensembl ENSMUSG00000031938

Feature

protein-coding

GO_BP

1 Terms

GO_MF

8 Terms

GO_CC

2 Terms

KEGG

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	ESC_FPKM	MEF_FPKM	p1C_FPKM	p4C_FPKM	iPSC_FPKM
2001119 (v2.0)	4931406C07Rik	NM_001199484,NM_001199485,NM_133732	70984	12.3005	14.3722	32.6518	16.794	9.85452	7.74067	8.97988	27.6739	5.65656	7.21283

SPR_Histone_Erkek_5KaroundTSS

DBTMEE	Gene	Entrez	H3.3_1_ChIP/Input	H3.3_1(Enrich; log2)	H3.3_2_ChIP/Input	H3.3_2(Enrich; log2)	H3K4me3_1_ChIP/Input	H3K4me3_1(Enrich; log2)	H3K4me3_2_ChIP/Input	H3K4me3_2(Enrich; log2)	H3K27me3_1_ChIP/Input	H3K27me3_1(Enrich; log2)	H3K27me3_2_ChIP/Input	H3K27me3_2(Enrich; log2)
2001119 (v2.0)	4931406C07Rik	70984	584/385	0.0881	411/385	-0.0219	186/385	2.5145	534/385	1.7966	22/385	-2.0229	108/385	-2.4168

SPR_Histone_Erkek_2KaroundTSS

DBTMEE	Gene	Entrez	H3.3_1_ChIP/Input	H3.3_1(Enrich; log2)	H3.3_2_ChIP/Input	H3.3_2(Enrich; log2)	H3K4me3_1_ChIP/Input	H3K4me3_1(Enrich; log2)	H3K4me3_2_ChIP/Input	H3K4me3_2(Enrich; log2)	H3K27me3_1_ChIP/Input	H3K27me3_1(Enrich; log2)	H3K27me3_2_ChIP/Input	H3K27me3_2(Enrich; log2)
2001119 (v2.0)	4931406C07Rik	70984	285/197	0.0198	182/197	-0.2292	177/197	3.3685	496/197	2.648	9/197	-2.2725	36/197	-2.9993

SPR_Methy_Kobayashi_5KaroundTSS

DBTMEE	Gene	Entrez	Total_mC_levels	Number_of_mCs	Averaged_Methylation_level
2001119 (v2.0)	4931406C07Rik	70984	70.1748	121	58

SPR_Methy_Kobayashi_2KaroundTSS

DBTMEE	Gene	Entrez	Total_mC_levels	Number_of_mCs	Averaged_Methylation_level
2001119 (v2.0)	4931406C07Rik	70984	30.2347	31	97.53

SOLiD_OocyteTo4C_FPKM_gene_guided

N/A

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

N/A

SOLiD_Partheno1C_FPKM_gene_guided

N/A

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

N/A

SOLiD_Partheno4C_FPKM_gene_guided

N/A

Illumina_Oo_2C_FPKM_gene_guided

N/A

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

N/A

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0001229 (v1.0)	22011	L0933C12-3	Mm.182227	4931406C07Rik	70984	U030497	NAP099064-001	4931406C07Rik;	TC941178,TC941174,TC941173	Q91V76	U,F,2	4.0431	4.09	3.7609	3.51	3.446	3.4124	3.4042

N/A

N/A

N/A