DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2002551
GeneApc
SynonymsCC1
Min
Descriptionadenomatosis polyposis coli
LocusNM_007462 UCSC: chr18:34380638-34481844(+) OLP: chr18:34380638-34481844(+)
DB links


Entrez 11789
MGI 88039
Ensembl ENSMUSG00000005871
Featureprotein-coding
GO_BP
  •   59 Terms
      mitotic cytokinesis (GO:0000281)
      kidney development (GO:0001822)
      hair follicle development (GO:0001942)
      protein complex assembly (GO:0006461)
      cellular response to DNA damage stimulus (GO:0006974)
      negative regulation of microtubule depolymerization (GO:0007026)
      cell cycle arrest (GO:0007050)
      metaphase/anaphase transition of mitotic cell cycle (GO:0007091)
      mitotic spindle assembly checkpoint (GO:0007094)
      establishment or maintenance of cell polarity (GO:0007163)
      pattern specification process (GO:0007389)
      axonogenesis (GO:0007409)
      negative regulation of cell proliferation (GO:0008285)
      axis specification (GO:0009798)
      anterior/posterior pattern specification (GO:0009952)
      dorsal/ventral pattern formation (GO:0009953)
      proximal/distal pattern formation (GO:0009954)
      Wnt signaling pathway (GO:0016055)
      cell migration (GO:0016477)
      stem cell maintenance (GO:0019827)
      negative regulation of Wnt signaling pathway (GO:0030178)
      regulation of cell migration (GO:0030334)
      positive regulation of cell migration (GO:0030335)
      regulation of epithelial cell differentiation (GO:0030856)
      positive regulation of epithelial cell differentiation (GO:0030858)
      positive regulation of microtubule polymerization (GO:0031116)
      cytoplasmic microtubule organization (GO:0031122)
      neuron projection development (GO:0031175)
      positive regulation of pseudopodium assembly (GO:0031274)
      regulation of microtubule-based process (GO:0032886)
      T cell differentiation in thymus (GO:0033077)
      somatic stem cell maintenance (GO:0035019)
      negative regulation of odontogenesis (GO:0042483)
      positive regulation of apoptotic process (GO:0043065)
      negative regulation of apoptotic process (GO:0043066)
      negative regulation of MAPK cascade (GO:0043409)
      skin development (GO:0043588)
      canonical Wnt signaling pathway involved in negative regulation of apoptotic process (GO:0044336)
      canonical Wnt signaling pathway involved in positive regulation of apoptotic process (GO:0044337)
      regulation of cell differentiation (GO:0045595)
      positive regulation of cell differentiation (GO:0045597)
      regulation of osteoblast differentiation (GO:0045667)
      regulation of osteoclast differentiation (GO:0045670)
      positive regulation of protein catabolic process (GO:0045732)
      negative regulation of cyclin-dependent protein serine/threonine kinase activity (GO:0045736)
      positive regulation of cell adhesion (GO:0045785)
      muscle cell cellular homeostasis (GO:0046716)
      thymus development (GO:0048538)
      negative regulation of epithelial cell proliferation (GO:0050680)
      regulation of nitrogen compound metabolic process (GO:0051171)
      chromosome organization (GO:0051276)
      regulation of cell cycle (GO:0051726)
      positive regulation of cell division (GO:0051781)
      regulation of attachment of spindle microtubules to kinetochore (GO:0051988)
      retina development in camera-type eye (GO:0060041)
      canonical Wnt signaling pathway (GO:0060070)
      negative regulation of epithelial cell proliferation involved in prostate gland development (GO:0060770)
      negative regulation of canonical Wnt signaling pathway (GO:0090090)
      regulation of glutamate metabolic process (GO:2000211)
GO_MF
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002551
(v2.0)		ApcNM_00746211789
4.2106238.982870.988577.720931.24869.481111.782561.309330.71238.44833
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2002551
(v2.0)		Apc11789
676/4380.113510/4380.1031161/4382.1267358/4381.036128/438-1.8727276/438-1.261
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2002551
(v2.0)		Apc11789
328/2070.1506240/2070.0968154/2073.1015332/2071.99977/207-2.664497/207-1.6775
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2002551
(v2.0)		Apc11789
78.408716946.4
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2002551
(v2.0)		Apc11789
10.91859911.03
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0002662
(v1.0)		5235L19609.1Apc11789
Apc2.68782.55712.40382.40572.83572.52782.6465
MOE430 N/A
Agilent44K N/A
Proteome N/A