DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2003749
GeneCalr
SynonymsCalregulin
CRT
Descriptioncalreticulin
LocusNM_007591 UCSC: chr8:87365987-87370830(-) OLP: chr8:87365987-87370830(-)
DB links


Entrez 12317
MGI 88252
Ensembl ENSMUSG00000003814
Vega OTTMUSG00000022277
Featureprotein-coding
GO_BP
  •   23 Terms
      negative regulation of transcription from RNA polymerase II promoter (GO:0000122)
      peptide antigen assembly with MHC class I protein complex (GO:0002502)
      protein folding (GO:0006457)
      protein export from nucleus (GO:0006611)
      cell cycle arrest (GO:0007050)
      positive regulation of cell proliferation (GO:0008284)
      positive regulation of gene expression (GO:0010628)
      negative regulation of translation (GO:0017148)
      cortical actin cytoskeleton organization (GO:0030866)
      negative regulation of intracellular steroid hormone receptor signaling pathway (GO:0033144)
      protein localization to nucleus (GO:0034504)
      regulation of meiosis (GO:0040020)
      negative regulation of neuron differentiation (GO:0045665)
      positive regulation of DNA replication (GO:0045740)
      positive regulation of cell cycle (GO:0045787)
      negative regulation of transcription, DNA-templated (GO:0045892)
      negative regulation of retinoic acid receptor signaling pathway (GO:0048387)
      positive regulation of phagocytosis (GO:0050766)
      protein stabilization (GO:0050821)
      chaperone-mediated protein folding (GO:0061077)
      cellular senescence (GO:0090398)
      positive regulation of substrate adhesion-dependent cell spreading (GO:1900026)
      positive regulation of dendritic cell chemotaxis (GO:2000510)
GO_MF
GO_CC
KEGG
  •   4 Terms
      Protein processing in endoplasmic reticulum (mmu04141)
      Phagosome (mmu04145)
      Antigen processing and presentation (mmu04612)
      Chagas disease (American trypanosomiasis) (mmu05142)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003749
(v2.0)		CalrNM_00759112317
793.765237.426153.325122.34125.851604.919562.339145.032147.735584.584
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2003749
(v2.0)		Calr12317
617/471-0.123374/471-0.4478247/4712.639713/4711.923822/471-2.3109205/471-1.7919
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2003749
(v2.0)		Calr12317
296/217-0.0646174/217-0.4325228/2173.6002634/2172.86373/217-3.731258/217-2.4724
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2003749
(v2.0)		Calr12317
64.504715541.62
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2003749
(v2.0)		Calr12317
21.949411019.95
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0003860
(v1.0)		1281C0192E09-3Mm.1971Calr12317
U030041NAP010008-001Calr;TC852298,TC852291,TC852285P14211U,F,22.943.10413.19713.04992.85423.02083.1114
MOE430 N/A
Agilent44K N/A
Proteome N/A