DBTMEE:2009822
| Gene | Hdgf |
| Synonyms | D3Ertd299e |
| Description | hepatoma-derived growth factor |
| Locus | NM_008231 UCSC: chr3:87710243-87720054(+) OLP: chr3:87710243-87720054(+)
|
| DB links |
Entrez 15191
MGI 1194494
Ensembl ENSMUSG00000004897
Vega OTTMUSG00000027208
|
| Feature | protein-coding |
| GO_BP |
-
 7 Terms
negative regulation of transcription from RNA polymerase II promoter (GO:0000122)
transcription, DNA-templated (GO:0006351)
regulation of transcription, DNA-templated (GO:0006355)
transcription from RNA polymerase II promoter (GO:0006366)
cellular process (GO:0009987)
protein localization to nucleus (GO:0034504)
positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
|
| GO_MF |
-
8 Terms
|
| GO_CC |
-
4 Terms
|
| KEGG | |
| Ver2_FPKM |
| DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | ESC_FPKM | MEF_FPKM | p1C_FPKM | p4C_FPKM | iPSC_FPKM |
|---|
2009822
(v2.0) | Hdgf | NM_008231 | 15191
| 181.71 | 60.6987 | 98.4021 | 311.632 | 693.899 | 325.674 | 134.881 | 113.052 | 642.903 | 373.344 |
|
| SPR_Histone_Erkek_5KaroundTSS |
| DBTMEE | Gene | Entrez | H3.3_1_ChIP/Input | H3.3_1(Enrich; log2) | H3.3_2_ChIP/Input | H3.3_2(Enrich; log2) | H3K4me3_1_ChIP/Input | H3K4me3_1(Enrich; log2) | H3K4me3_2_ChIP/Input | H3K4me3_2(Enrich; log2) | H3K27me3_1_ChIP/Input | H3K27me3_1(Enrich; log2) | H3K27me3_2_ChIP/Input | H3K27me3_2(Enrich; log2) |
|---|
2009822
(v2.0) | Hdgf | 15191
| 675/428 | 0.1441 | 386/428 | -0.2645 | 207/428 | 2.5197 | 474/428 | 1.4731 | 21/428 | -2.2382 | 190/428 | -1.7629 |
|
| SPR_Histone_Erkek_2KaroundTSS |
| DBTMEE | Gene | Entrez | H3.3_1_ChIP/Input | H3.3_1(Enrich; log2) | H3.3_2_ChIP/Input | H3.3_2(Enrich; log2) | H3K4me3_1_ChIP/Input | H3K4me3_1(Enrich; log2) | H3K4me3_2_ChIP/Input | H3K4me3_2(Enrich; log2) | H3K27me3_1_ChIP/Input | H3K27me3_1(Enrich; log2) | H3K27me3_2_ChIP/Input | H3K27me3_2(Enrich; log2) |
|---|
2009822
(v2.0) | Hdgf | 15191
| 347/167 | 0.5396 | 184/167 | 0.0235 | 169/167 | 3.5256 | 366/167 | 2.4456 | 4/167 | -3.0395 | 61/167 | -2.0255 |
|
| SPR_Methy_Kobayashi_5KaroundTSS |
| DBTMEE | Gene | Entrez | Total_mC_levels | Number_of_mCs | Averaged_Methylation_level |
|---|
2009822
(v2.0) | Hdgf | 15191
| 45.1501 | 108 | 41.81 |
|
| SPR_Methy_Kobayashi_2KaroundTSS |
| DBTMEE | Gene | Entrez | Total_mC_levels | Number_of_mCs | Averaged_Methylation_level |
|---|
2009822
(v2.0) | Hdgf | 15191
| 14.4155 | 73 | 19.75 |
|
| SOLiD_OocyteTo4C_FPKM_gene_guided |
N/A |
| SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
N/A |
| SOLiD_Partheno1C_FPKM_gene_guided |
N/A |
| SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
N/A |
| SOLiD_Partheno4C_FPKM_gene_guided |
N/A |
| Illumina_Oo_2C_FPKM_gene_guided |
N/A |
| SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
N/A |
| NIA60mer |
| DBTMEE | Array_Feature_Number | Oligo_Parent_Clone | Unigene | Gene | Entrez | U_Cluster | NAP_Cluster | Gene_U/NAP | TIGR | SwissProt | EST | Oo | 1C | 2C | 4C | 8C | Morula | Blastocyst |
|---|
0009939
(v1.0) | 3395 | C0652H10-3 | Mm.1141 | Hdgf | 15191
| U042446 | NAP093396-001 | Hdgf; | TC835855,TC835849,TC835842,TC835841 | P51859 | U,F,2 | 3.2385 | 3.3254 | 3.5625 | 3.3659 | 3.2575 | 3.3541 | 3.3404 |
0009939
(v1.0) | 7325 | H3046C06-3 | | Hdgf | 15191
| U042446 | NAP093396-001 | Hdgf; | TC835849,TC835842 | P51859 | U,F,2 | 3.5182 | 3.5705 | 3.6897 | 4.0868 | 3.89 | 4.0435 | 3.8215 |
|
| MOE430 |
N/A |
| Agilent44K |
N/A |
| Proteome |
N/A |
