DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2009843
GeneHectd3
Synonyms
DescriptionHECT domain containing 3
LocusNM_175244 UCSC: chr4:116667953-116677882(+) OLP: chr4:116667953-116677882(+)
DB links


Entrez 76608
MGI 1923858
Ensembl ENSMUSG00000046861
Vega OTTMUSG00000009776
Featureprotein-coding
GO_BP
  •   3 Terms
      protein ubiquitination (GO:0016567)
      protein ubiquitination involved in ubiquitin-dependent protein catabolic process (GO:0042787)
      proteasome-mediated ubiquitin-dependent protein catabolic process (GO:0043161)
GO_MF
  •   13 Terms
      ubiquitin-protein transferase activity (GO:0004842)
      UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity (GO:0008766)
      ligase activity (GO:0016874)
      ribosomal S6-glutamic acid ligase activity (GO:0018169)
      syntaxin binding (GO:0019905)
      coenzyme F420-0 gamma-glutamyl ligase activity (GO:0043773)
      coenzyme F420-2 alpha-glutamyl ligase activity (GO:0043774)
      protein-glycine ligase activity (GO:0070735)
      protein-glycine ligase activity, initiating (GO:0070736)
      protein-glycine ligase activity, elongating (GO:0070737)
      tubulin-glycine ligase activity (GO:0070738)
      protein-glutamic acid ligase activity (GO:0070739)
      tubulin-glutamic acid ligase activity (GO:0070740)
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2009843
(v2.0)		Hectd3NM_17524476608
12.956329.187633.62212.09135.365326.154593.7097548.71736.98446.70807
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2009843
(v2.0)		Hectd376608
681/531-0.1536358/531-0.6833199/5312.1598581/5311.456837/531-1.7581278/531-1.5279
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2009843
(v2.0)		Hectd376608
328/236-0.0377150/236-0.7657184/2363.1775553/2362.547118/236-1.6022162/236-1.1348
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2009843
(v2.0)		Hectd376608
87.733218746.92
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2009843
(v2.0)		Hectd376608
18.528110018.53
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A