DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2014341
GeneNf1
Synonymsneurofibromin
Nf-1
Descriptionneurofibromatosis 1
LocusNM_010897 UCSC: chr11:79153394-79395111(+) OLP: chr11:79153394-79395111(+)
DB links


Entrez 18015
MGI 97306
Ensembl ENSMUSG00000020716
Vega OTTMUSG00000000164
Featureprotein-coding
GO_BP
  •   68 Terms
      MAPK cascade (GO:0000165)
      osteoblast differentiation (GO:0001649)
      metanephros development (GO:0001656)
      response to hypoxia (GO:0001666)
      liver development (GO:0001889)
      negative regulation of endothelial cell proliferation (GO:0001937)
      positive regulation of endothelial cell proliferation (GO:0001938)
      regulation of cell-matrix adhesion (GO:0001952)
      negative regulation of cell-matrix adhesion (GO:0001953)
      negative regulation of protein kinase activity (GO:0006469)
      cell communication (GO:0007154)
      signal transduction (GO:0007165)
      Ras protein signal transduction (GO:0007265)
      negative regulation of neuroblast proliferation (GO:0007406)
      brain development (GO:0007420)
      peripheral nervous system development (GO:0007422)
      heart development (GO:0007507)
      skeletal muscle tissue development (GO:0007519)
      negative regulation of cell proliferation (GO:0008285)
      visual learning (GO:0008542)
      extrinsic apoptotic signaling pathway via death domain receptors (GO:0008625)
      Schwann cell development (GO:0014044)
      phosphatidylinositol 3-kinase signaling (GO:0014065)
      negative regulation of angiogenesis (GO:0016525)
      spinal cord development (GO:0021510)
      forebrain astrocyte development (GO:0021897)
      neural tube development (GO:0021915)
      cerebral cortex development (GO:0021987)
      myelination in peripheral nervous system (GO:0022011)
      actin cytoskeleton organization (GO:0030036)
      extracellular matrix organization (GO:0030198)
      collagen fibril organization (GO:0030199)
      adrenal gland development (GO:0030325)
      negative regulation of cell migration (GO:0030336)
      regulation of synaptic transmission, GABAergic (GO:0032228)
      regulation of Ras GTPase activity (GO:0032318)
      positive regulation of Ras GTPase activity (GO:0032320)
      negative regulation of Rac protein signal transduction (GO:0035021)
      wound healing (GO:0042060)
      regulation of cell proliferation (GO:0042127)
      negative regulation of transcription factor import into nucleus (GO:0042992)
      positive regulation of apoptotic process (GO:0043065)
      negative regulation of MAP kinase activity (GO:0043407)
      negative regulation of MAPK cascade (GO:0043409)
      pigmentation (GO:0043473)
      positive regulation of neuron apoptotic process (GO:0043525)
      regulation of blood vessel endothelial cell migration (GO:0043535)
      regulation of bone resorption (GO:0045124)
      regulation of neuron differentiation (GO:0045664)
      negative regulation of osteoclast differentiation (GO:0045671)
      regulation of glial cell differentiation (GO:0045685)
      positive regulation of adenylate cyclase activity (GO:0045762)
      regulation of angiogenesis (GO:0045765)
      negative regulation of Ras protein signal transduction (GO:0046580)
      negative regulation of neurotransmitter secretion (GO:0046929)
      negative regulation of fibroblast proliferation (GO:0048147)
      regulation of long-term neuronal synaptic plasticity (GO:0048169)
      sympathetic nervous system development (GO:0048485)
      camera-type eye morphogenesis (GO:0048593)
      negative regulation of astrocyte differentiation (GO:0048712)
      negative regulation of oligodendrocyte differentiation (GO:0048715)
      smooth muscle tissue development (GO:0048745)
      artery morphogenesis (GO:0048844)
      forebrain morphogenesis (GO:0048853)
      cognition (GO:0050890)
      regulation of small GTPase mediated signal transduction (GO:0051056)
      positive regulation of extrinsic apoptotic signaling pathway via death domain receptors (GO:1902043)
      positive regulation of extrinsic apoptotic signaling pathway in absence of ligand (GO:2001241)
GO_MF
GO_CC
KEGG
  •   1 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014341
(v2.0)		Nf1NM_01089718015
3.486128.4420111.96310.67675.115821.5909317.81039.80015.120061.23195
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2014341
(v2.0)		Nf118015
682/4210.1827444/421-0.0394176/4212.31445/4211.405987/421-0.2147545/421-0.2263
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2014341
(v2.0)		Nf118015
333/1690.4633193/1690.0749172/1693.5348400/1692.556517/169-1.2083114/169-1.1568
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2014341
(v2.0)		Nf118015
54.25112045.21
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2014341
(v2.0)		Nf118015
15.09927919.11
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0013886
(v1.0)		16548K0428H05-3Mm.4820Nf118015
U013036NAP004732-001Nf1;TC832204Q046903.77923.85163.84783.69653.46233.6413.4845
MOE430 N/A
Agilent44K N/A
Proteome N/A