DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:2014642

Gene

Nras

Synonyms

N-ras

Description

neuroblastoma ras oncogene

Locus

NM_010937 UCSC: chr3:102862208-102871837(+) OLP: chr3:102862208-102871837(+)

DB links

Entrez 18176
MGI 97376
Ensembl ENSMUSG00000027852
Vega OTTMUSG00000021269

Feature

protein-coding

GO_BP

6 Terms

GO_MF

4 Terms

GO_CC

5 Terms

KEGG

30 Terms

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	ESC_FPKM	MEF_FPKM	p1C_FPKM	p4C_FPKM	iPSC_FPKM
2014642 (v2.0)	Nras	NM_010937	18176	22.7645	19.7642	40.6076	26.8662	12.9897	25.8792	27.0712	35.9635	12.6723	27.8112

SPR_Histone_Erkek_5KaroundTSS

DBTMEE	Gene	Entrez	H3.3_1_ChIP/Input	H3.3_1(Enrich; log2)	H3.3_2_ChIP/Input	H3.3_2(Enrich; log2)	H3K4me3_1_ChIP/Input	H3K4me3_1(Enrich; log2)	H3K4me3_2_ChIP/Input	H3K4me3_2(Enrich; log2)	H3K27me3_1_ChIP/Input	H3K27me3_1(Enrich; log2)	H3K27me3_2_ChIP/Input	H3K27me3_2(Enrich; log2)
2014642 (v2.0)	Nras	18176	596/360	0.2139	415/360	0.0887	180/360	2.5612	502/360	1.8038	9/360	-3.1287	61/360	-3.1291

SPR_Histone_Erkek_2KaroundTSS

DBTMEE	Gene	Entrez	H3.3_1_ChIP/Input	H3.3_1(Enrich; log2)	H3.3_2_ChIP/Input	H3.3_2(Enrich; log2)	H3K4me3_1_ChIP/Input	H3K4me3_1(Enrich; log2)	H3K4me3_2_ChIP/Input	H3K4me3_2(Enrich; log2)	H3K27me3_1_ChIP/Input	H3K27me3_1(Enrich; log2)	H3K27me3_2_ChIP/Input	H3K27me3_2(Enrich; log2)
2014642 (v2.0)	Nras	18176	250/144	0.2813	170/144	0.1225	176/144	3.782	489/144	3.073	0/144	-5.1533	27/144	-2.9456

SPR_Methy_Kobayashi_5KaroundTSS

DBTMEE	Gene	Entrez	Total_mC_levels	Number_of_mCs	Averaged_Methylation_level
2014642 (v2.0)	Nras	18176	55.0005	109	50.46

SPR_Methy_Kobayashi_2KaroundTSS

DBTMEE	Gene	Entrez	Total_mC_levels	Number_of_mCs	Averaged_Methylation_level
2014642 (v2.0)	Nras	18176	23.454	75	31.27

SOLiD_OocyteTo4C_FPKM_gene_guided

N/A

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

N/A

SOLiD_Partheno1C_FPKM_gene_guided

N/A

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

N/A

SOLiD_Partheno4C_FPKM_gene_guided

N/A

Illumina_Oo_2C_FPKM_gene_guided

N/A

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

N/A

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0014185 (v1.0)	977	C0170D12-3	Mm.734	Nras	18176	U003655	NAP090783-1	Nras;	TC874875	P08556	U,F,2	3.5265	3.6857	3.1651	2.8998	2.8557	2.9419	3.249
0014185 (v1.0)	9341	H3079H06-3	Mm.734	Nras	18176	U003655	NAP090783-1	Nras;	TC874872	P08556	U,F,2	2.6128	2.7833	2.9405	3.0645	2.8643	3.0589	3.1314
0014185 (v1.0)	15312	K0125H03-3	Mm.734	Nras	18176	U024452	NAP123782-1	Nras;		P08556	U,F,2	3.7262	3.6889	3.1975	3.2111	3.2121	3.2163	3.28

N/A

N/A

N/A