DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2014650
GeneNrf1
SynonymsD6Ertd415e
Descriptionnuclear respiratory factor 1
LocusNM_001164227 UCSC: chr6:29997988-30095197(+) OLP: chr6:29997988-30095197(+)
NM_001164228 UCSC: chr6:29997988-30095197(+) OLP: chr6:29997988-30095197(+)
NM_001164226 UCSC: chr6:29997988-30103458(+) OLP: chr6:29997988-30103458(+)
NM_010938 UCSC: chr6:29997988-30103458(+) OLP: chr6:29997988-30103458(+)
NM_001164230 UCSC: chr6:29997988-30080115(+) OLP: chr6:29997988-30080115(+)
NM_001164229 UCSC: chr6:30026321-30080115(+) OLP: chr6:30026321-30080115(+)
DB links


Entrez 18181
MGI 1332235
Ensembl ENSMUSG00000058440
Vega OTTMUSG00000014351
Featureprotein-coding
GO_BP
  •   5 Terms
      transcription, DNA-templated (GO:0006351)
      regulation of transcription, DNA-templated (GO:0006355)
      mitochondrion organization (GO:0007005)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
      response to electrical stimulus (GO:0051602)
GO_MF
  •   4 Terms
      RNA polymerase II core promoter proximal region sequence-specific DNA binding (GO:0000978)
      RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription (GO:0001077)
      DNA binding (GO:0003677)
      sequence-specific DNA binding transcription factor activity (GO:0003700)
GO_CC
KEGG
  •   1 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014650
(v2.0)		Nrf1NM_001164226,NM_001164227,NM_001164228,NM_001164229,NM_001164230,NM_01093818181
4.5816971.802477.708697.093674.52515.5215711.8382108.76767.97775.42035
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2014650
(v2.0)		Nrf118181
738/3540.5458502/3540.3868122/3542.0274331/3541.228552/354-0.6988394/354-0.4434
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2014650
(v2.0)		Nrf118181
404/1181.2557239/1180.8964107/1183.3321257/1182.42942/118-3.289983/118-1.093
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2014650
(v2.0)		Nrf118181
61.071213046.98
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2014650
(v2.0)		Nrf118181
17.14878320.66
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0014191
(v1.0)		1062C0176A02-3Mm.45045Nrf118181
TC8212032.05182.3932.55982.90522.21072.28992.2717
0014191
(v1.0)		7911H3056C03-3Mm.45045Nrf118181
U006624NAP000680-001Nrf1;TC870409,TC870407,TC821203Q9WU00U,F,22.8992.85392.92883.01632.75812.77262.7388
MOE430 N/A
Agilent44K N/A
Proteome N/A