DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2017373
GenePrkd1
SynonymsPkcm
PKD1
Prkcm
Descriptionprotein kinase D1
LocusNM_008858 UCSC: chr12:51442219-51750210(-) OLP: chr12:51442219-51750210(-)
DB links


Entrez 18760
MGI 99879
Ensembl ENSMUSG00000002688
Featureprotein-coding
GO_BP
  •   32 Terms
      angiogenesis (GO:0001525)
      positive regulation of endothelial cell proliferation (GO:0001938)
      immune system process (GO:0002376)
      protein phosphorylation (GO:0006468)
      apoptotic process (GO:0006915)
      inflammatory response (GO:0006954)
      Golgi organization (GO:0007030)
      nervous system development (GO:0007399)
      positive regulation of endothelial cell migration (GO:0010595)
      regulation of keratinocyte proliferation (GO:0010837)
      positive regulation of neuron projection development (GO:0010976)
      phosphorylation (GO:0016310)
      peptidyl-serine phosphorylation (GO:0018105)
      cell differentiation (GO:0030154)
      positive regulation of CREB transcription factor activity (GO:0032793)
      positive regulation of peptidyl-serine phosphorylation (GO:0033138)
      cellular response to oxidative stress (GO:0034599)
      intracellular signal transduction (GO:0035556)
      cellular response to vascular endothelial growth factor stimulus (GO:0035924)
      positive regulation of endothelial cell chemotaxis by VEGF-activated vascular endothelial growth factor receptor signaling pathway (GO:0038033)
      positive regulation of I-kappaB kinase/NF-kappaB signaling (GO:0043123)
      positive regulation of blood vessel endothelial cell migration (GO:0043536)
      innate immune response (GO:0045087)
      positive regulation of osteoblast differentiation (GO:0045669)
      positive regulation of angiogenesis (GO:0045766)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
      vascular endothelial growth factor receptor signaling pathway (GO:0048010)
      Golgi vesicle transport (GO:0048193)
      positive regulation of NF-kappaB transcription factor activity (GO:0051092)
      negative regulation of cell death (GO:0060548)
      positive regulation of histone deacetylase activity (GO:1901727)
      positive regulation of endothelial cell chemotaxis (GO:2001028)
GO_MF
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017373
(v2.0)		Prkd1NM_00885818760
2.4555143.889652.913217.65474.405120.6845573.1324843.68654.919960.935846
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2017373
(v2.0)		Prkd118760
729/4380.2217513/4380.111618/438-0.9652300/4380.7819179/4380.7612945/4380.5091
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2017373
(v2.0)		Prkd118760
391/2090.3892239/2090.076915/209-0.1877236/2091.4954128/2091.3332751/2091.242
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2017373
(v2.0)		Prkd118760
44.137811538.38
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2017373
(v2.0)		Prkd118760
11.62188014.53
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A