DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2017454
GenePrpf38a
Synonyms
DescriptionPRP38 pre-mRNA processing factor 38 (yeast) domain containing A
LocusNM_172697 UCSC: chr4:108237472-108251941(-) OLP: chr4:108237472-108251941(-)
DB links


Entrez 230596
MGI 1916962
Ensembl ENSMUSG00000063800
Vega OTTMUSG00000008232
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017454
(v2.0)		Prpf38aNM_172697230596
15.153174.497878.149486.619168.083125.927217.223972.777568.18834.1378
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2017454
(v2.0)		Prpf38a230596
491/3210.1370/3210.088590/3211.7289266/3211.054330/321-1.333253/321-0.9387
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2017454
(v2.0)		Prpf38a230596
236/181-0.1293151/181-0.375389/1812.4995238/1811.712420/181-1.0826164/181-0.7363
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2017454
(v2.0)		Prpf38a230596
37.364212130.88
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2017454
(v2.0)		Prpf38a230596
9.42799210.25
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A