DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2017717
GenePtpra
SynonymsPTP[a]
Ptpa
PTPalpha
RPTPalpha
RPTRalpha
Descriptionprotein tyrosine phosphatase, receptor type, A
LocusNM_008980 UCSC: chr2:130276014-130380036(+) OLP: chr2:130276014-130380036(+)
NM_001163688 UCSC: chr2:130276014-130380036(+) OLP: chr2:130276014-130380036(+)
DB links


Entrez 19262
MGI 97808
Ensembl ENSMUSG00000027303
Vega OTTMUSG00000015498
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017717
(v2.0)		PtpraNM_001163688,NM_00898019262
29.754425.31131.54867.889448.403527.5457731.938430.76529.598467.44529
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2017717
(v2.0)		Ptpra19262
690/4670.0503422/467-0.2618112/4671.517317/4670.769180/467-0.4824516/467-0.4543
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2017717
(v2.0)		Ptpra19262
345/2170.1554179/217-0.3919103/2172.4615304/2171.805844/217-0.2393351/2170.094
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2017717
(v2.0)		Ptpra19262
38.953811733.29
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2017717
(v2.0)		Ptpra19262
8.85268110.93
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017211
(v1.0)		2423C0322A08-3Mm.587Ptpra19262
U002478NAP006988-001Ptpra;TC876860,TC842603P18052U,F,23.38693.52133.23753.30463.09723.48983.8011
0017211
(v1.0)		13611J0059F01-3Mm.587Ptpra19262
U002478NAP006988-001Ptpra;TC842608,TC842603P18052U,F,22.60872.34462.44752.28922.41432.47342.5904
MOE430 N/A
Agilent44K N/A
Proteome N/A