DBTMEE:2017750
| Gene | Pum1 |
| Synonyms | Pumm |
| Description | pumilio RNA-binding family member 1 |
| Locus | NM_001159606 UCSC: chr4:130219274-130337479(+) OLP: chr4:130219274-130337479(+)
NM_001159605 UCSC: chr4:130219274-130337479(+) OLP: chr4:130219274-130337479(+)
NM_001159603 UCSC: chr4:130219274-130337479(+) OLP: chr4:130219274-130337479(+)
NM_001159604 UCSC: chr4:130219274-130337479(+) OLP: chr4:130219274-130337479(+)
NM_030722 UCSC: chr4:130219274-130337479(+) OLP: chr4:130219274-130337479(+)
|
| DB links |
Entrez 80912
MGI 1931749
Ensembl ENSMUSG00000028580
Vega OTTMUSG00000009596
|
| Feature | protein-coding |
| GO_BP |
-
 1 Terms
|
| GO_MF |
-
2 Terms
|
| GO_CC |
-
1 Terms
|
| KEGG | |
| Ver2_FPKM |
| DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | ESC_FPKM | MEF_FPKM | p1C_FPKM | p4C_FPKM | iPSC_FPKM |
|---|
2017750
(v2.0) | Pum1 | NM_001159603,NM_001159604,NM_001159605,NM_001159606,NM_030722 | 80912
| 10.9592 | 7.67832 | 9.86622 | 55.5118 | 83.7533 | 16.1437 | 15.5155 | 8.51183 | 58.5312 | 15.3068 |
|
| SPR_Histone_Erkek_5KaroundTSS |
| DBTMEE | Gene | Entrez | H3.3_1_ChIP/Input | H3.3_1(Enrich; log2) | H3.3_2_ChIP/Input | H3.3_2(Enrich; log2) | H3K4me3_1_ChIP/Input | H3K4me3_1(Enrich; log2) | H3K4me3_2_ChIP/Input | H3K4me3_2(Enrich; log2) | H3K27me3_1_ChIP/Input | H3K27me3_1(Enrich; log2) | H3K27me3_2_ChIP/Input | H3K27me3_2(Enrich; log2) |
|---|
2017750
(v2.0) | Pum1 | 80912
| 638/373 | 0.2609 | 437/373 | 0.112 | 327/373 | 3.3694 | 866/373 | 2.5384 | 32/373 | -1.4569 | 274/373 | -1.0403 |
|
| SPR_Histone_Erkek_2KaroundTSS |
| DBTMEE | Gene | Entrez | H3.3_1_ChIP/Input | H3.3_1(Enrich; log2) | H3.3_2_ChIP/Input | H3.3_2(Enrich; log2) | H3K4me3_1_ChIP/Input | H3K4me3_1(Enrich; log2) | H3K4me3_2_ChIP/Input | H3K4me3_2(Enrich; log2) | H3K27me3_1_ChIP/Input | H3K27me3_1(Enrich; log2) | H3K27me3_2_ChIP/Input | H3K27me3_2(Enrich; log2) |
|---|
2017750
(v2.0) | Pum1 | 80912
| 364/168 | 0.5997 | 245/168 | 0.4259 | 313/168 | 4.4028 | 785/168 | 3.5359 | 11/168 | -1.7849 | 94/168 | -1.4226 |
|
| SPR_Methy_Kobayashi_5KaroundTSS |
| DBTMEE | Gene | Entrez | Total_mC_levels | Number_of_mCs | Averaged_Methylation_level |
|---|
2017750
(v2.0) | Pum1 | 80912
| 33.8452 | 124 | 27.29 |
|
| SPR_Methy_Kobayashi_2KaroundTSS |
| DBTMEE | Gene | Entrez | Total_mC_levels | Number_of_mCs | Averaged_Methylation_level |
|---|
2017750
(v2.0) | Pum1 | 80912
| 10.918 | 90 | 12.13 |
|
| SOLiD_OocyteTo4C_FPKM_gene_guided |
N/A |
| SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
N/A |
| SOLiD_Partheno1C_FPKM_gene_guided |
N/A |
| SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
N/A |
| SOLiD_Partheno4C_FPKM_gene_guided |
N/A |
| Illumina_Oo_2C_FPKM_gene_guided |
N/A |
| SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
N/A |
| NIA60mer |
| DBTMEE | Array_Feature_Number | Oligo_Parent_Clone | Unigene | Gene | Entrez | U_Cluster | NAP_Cluster | Gene_U/NAP | TIGR | SwissProt | EST | Oo | 1C | 2C | 4C | 8C | Morula | Blastocyst |
|---|
0017243
(v1.0) | 604 | C0120D05-3 | Mm.34701 | Pum1 | 80912
| U004886 | NAP094920-001 | Pum1; | TC793234,TC793228,TC793226 | Q9EPU6 | U,F,2 | 3.2908 | 3.1927 | 3.1729 | 3.3981 | 3.308 | 3.3747 | 3.4541 |
0017243
(v1.0) | 14940 | J0914D04-3 | Mm.34701 | Pum1 | 80912
| U004886 | NAP094920-001 | Pum1; | TC793226 | Q9EPU6 | U,F,2 | 3.0656 | 2.9361 | 3.2394 | 3.6825 | 3.3114 | 3.5096 | 3.4415 |
|
| MOE430 |
N/A |
| Agilent44K |
N/A |
| Proteome |
N/A |
