DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2018494
GeneRnps1
Synonyms
Descriptionribonucleic acid binding protein S1
LocusNM_001080128 UCSC: chr17:24551620-24562842(+) OLP: chr17:24551620-24562842(+)
NM_009070 UCSC: chr17:24551620-24562842(+) OLP: chr17:24551620-24562842(+)
NM_001080127 UCSC: chr17:24551620-24562842(+) OLP: chr17:24551620-24562842(+)
DB links


Entrez 19826
MGI 97960
Ensembl ENSMUSG00000034681
Featureprotein-coding
GO_BP
  •   6 Terms
      nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (GO:0000184)
      regulation of alternative mRNA splicing, via spliceosome (GO:0000381)
      mRNA processing (GO:0006397)
      RNA splicing (GO:0008380)
      positive regulation of apoptotic process (GO:0043065)
      negative regulation of mRNA splicing, via spliceosome (GO:0048025)
GO_MF
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018494
(v2.0)		Rnps1NM_001080127,NM_001080128,NM_00907019826
28.857458.5782145.126119.54182.26105.13964.3697173.054143.329119.166
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2018494
(v2.0)		Rnps119826
653/460-0.0074405/460-0.2992266/4602.7787599/4601.70678/460-3.630881/460-3.0814
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2018494
(v2.0)		Rnps119826
351/1950.3337185/195-0.1911257/1953.9179578/1952.88296/195-2.772747/195-2.6137
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2018494
(v2.0)		Rnps119826
61.022615639.12
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2018494
(v2.0)		Rnps119826
21.905711219.56
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017966
(v1.0)		11676H3121D06-3Mm.1951Rnps119826
U017634NAP098108-001Rnps1;TC852602,TC852598Q62150U,F,24.45344.35913.73344.35924.10924.14843.947
MOE430 N/A
Agilent44K N/A
Proteome N/A