DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2018622
GeneRps19
SynonymsDsk3
Descriptionribosomal protein S19
LocusNM_023133 UCSC: chr7:25669733-25674821(+) OLP: chr7:25669733-25674821(+)
DB links


Entrez 20085
MGI 1333780
Ensembl ENSMUSG00000040952
Vega OTTMUSG00000022935
Featureprotein-coding
GO_BP
  •   12 Terms
      ribosomal small subunit assembly (GO:0000028)
      maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (GO:0000462)
      monocyte chemotaxis (GO:0002548)
      rRNA processing (GO:0006364)
      translation (GO:0006412)
      nucleolus organization (GO:0007000)
      erythrocyte differentiation (GO:0030218)
      maturation of SSU-rRNA (GO:0030490)
      ribosomal small subunit biogenesis (GO:0042274)
      protein tetramerization (GO:0051262)
      positive regulation of respiratory burst involved in inflammatory response (GO:0060265)
      negative regulation of respiratory burst involved in inflammatory response (GO:0060266)
GO_MF
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018622
(v2.0)		Rps19NM_02313320085
745.674.084475.70988305.444822.8542571.59204.5742.72989732.3422969.07
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2018622
(v2.0)		Rps1920085
817/4750.2691470/475-0.1312638/4753.99261374/4752.857151/475-1.1461391/475-0.8776
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2018622
(v2.0)		Rps1920085
438/1890.6968222/1890.1154615/1895.21581302/1894.09767/189-2.535979/189-1.838
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2018622
(v2.0)		Rps1920085
92.007718150.83
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2018622
(v2.0)		Rps1920085
27.29211423.94
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018094
(v1.0)		2861C0450H03-3Mm.103634Rps1920085
U007810NAP092612-001TC924538,TC924536,TC924530,TC924529,TC924528,TC924527,TC811290Q9CZX83.94023.70764.09654.80835.1615.07875.0597
MOE430 N/A
Agilent44K N/A
Proteome N/A