DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2019884
GeneSmc5
SynonymsSmc5l1
Descriptionstructural maintenance of chromosomes 5
LocusNM_001252685 UCSC: chr19:23280931-23347089(-) OLP: chr19:23280931-23347089(-)
NM_001252684 UCSC: chr19:23280931-23348387(-) OLP: chr19:23280931-23348387(-)
NM_153808 UCSC: chr19:23280931-23348387(-) OLP: chr19:23280931-23348387(-)
DB links


Entrez 226026
MGI 2385088
Ensembl ENSMUSG00000024943
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2019884
(v2.0)		Smc5NM_001252684,NM_001252685,NM_153808226026
3.807367.279616.7685922.211643.290413.84328.02364.3882437.596411.7551
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2019884
(v2.0)		Smc5226026
660/3510.3972460/3510.273388/3511.5724311/3511.151171/351-0.2446429/351-0.3089
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2019884
(v2.0)		Smc5226026
332/1450.6786188/1450.256978/1452.609247/1452.080825/145-0.4625132/145-0.7283
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2019884
(v2.0)		Smc5226026
58.8399065.38
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2019884
(v2.0)		Smc5226026
17.20614637.4
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0019325
(v1.0)		18250L0072E01-3Mm.23267SMC5226026
U038917NAP094094-001SMC5;TC848877,TC848876,TC837915Q922K32.15282.56942.55693.22692.80562.99232.6685
MOE430 N/A
Agilent44K N/A
Proteome N/A