DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2020126
GeneSnw1
SynonymsNCoA-62
Skiip
SKIP
SNW1
DescriptionSNW domain containing 1
LocusNM_025507 UCSC: chr12:88790860-88813249(-) OLP: chr12:88790860-88813249(-)
DB links


Entrez 66354
MGI 1913604
Ensembl ENSMUSG00000021039
Featureprotein-coding
GO_BP
  •   20 Terms
      negative regulation of transcription from RNA polymerase II promoter (GO:0000122)
      mRNA splicing, via spliceosome (GO:0000398)
      transcription, DNA-templated (GO:0006351)
      regulation of transcription, DNA-templated (GO:0006355)
      mRNA processing (GO:0006397)
      RNA splicing (GO:0008380)
      positive regulation of transforming growth factor beta receptor signaling pathway (GO:0030511)
      skeletal muscle cell differentiation (GO:0035914)
      intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (GO:0042771)
      positive regulation by host of viral transcription (GO:0043923)
      negative regulation of transcription, DNA-templated (GO:0045892)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
      positive regulation of mRNA splicing, via spliceosome (GO:0048026)
      retinoic acid receptor signaling pathway (GO:0048384)
      regulation of retinoic acid receptor signaling pathway (GO:0048385)
      positive regulation of neurogenesis (GO:0050769)
      positive regulation of histone H3-K4 methylation (GO:0051571)
      regulation of vitamin D receptor signaling pathway (GO:0070562)
      positive regulation of vitamin D receptor signaling pathway (GO:0070564)
      cellular response to retinoic acid (GO:0071300)
GO_MF
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2020126
(v2.0)		Snw1NM_02550766354
24.322896.1148118.72251.668456.880242.252546.4515111.61750.108155.4365
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2020126
(v2.0)		Snw166354
588/3980.0501419/398-0.0419118/3981.8159325/3981.0343102/3980.0926686/3980.1857
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2020126
(v2.0)		Snw166354
274/198-0.0439194/198-0.144997/1982.5006238/1981.584625/198-0.9012168/198-0.8307
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2020126
(v2.0)		Snw166354
48.296510645.56
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2020126
(v2.0)		Snw166354
16.82277323.04
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A