DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2021011
GeneTbp
SynonymsGtf2d
DescriptionTATA box binding protein
LocusNM_013684 UCSC: chr17:15636852-15654391(+) OLP: chr17:15636852-15654391(+)
DB links


Entrez 21374
MGI 101838
Ensembl ENSMUSG00000014767
Vega OTTMUSG00000030550
Featureprotein-coding
GO_BP
  •   6 Terms
      transcription, DNA-templated (GO:0006351)
      DNA-templated transcription, initiation (GO:0006352)
      regulation of transcription, DNA-templated (GO:0006355)
      transcription from RNA polymerase II promoter (GO:0006366)
      transcription from RNA polymerase III promoter (GO:0006383)
      positive regulation of transcription, DNA-templated (GO:0045893)
GO_MF
  •   7 Terms
      RNA polymerase II repressing transcription factor binding (GO:0001103)
      DNA binding (GO:0003677)
      sequence-specific DNA binding transcription factor activity (GO:0003700)
      protein binding (GO:0005515)
      transcription factor binding (GO:0008134)
      transcription regulatory region DNA binding (GO:0044212)
      repressing transcription factor binding (GO:0070491)
GO_CC
KEGG
  •   2 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2021011
(v2.0)		TbpNM_01368421374
8.1522863.683964.71573.349751.429715.502118.487760.362541.157619.8731
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2021011
(v2.0)		Tbp21374
773/4320.3259550/4320.2317249/4322.772817/4322.2447/432-3.7109106/432-2.6092
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2021011
(v2.0)		Tbp21374
410/2020.5063265/2020.2742224/2023.6725704/2023.11672/202-4.044954/202-2.4699
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2021011
(v2.0)		Tbp21374
49.253318127.21
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2021011
(v2.0)		Tbp21374
10.77071248.69
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0020408
(v1.0)		9055H3075H08-3Mm.43711Tbp21374
U017529NAP003111-001Tbp;TC876450,TC876449,TC859604P29037U,F,23.24213.3463.58353.53733.26893.20613.2004
MOE430 N/A
Agilent44K N/A
Proteome N/A