DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2021104
GeneTdp2
SynonymsD13Ertd656e
Ttrap
Descriptiontyrosyl-DNA phosphodiesterase 2
LocusNM_019551 UCSC: chr13:24923528-24934022(+) OLP: chr13:24923528-24934022(+)
DB links


Entrez 56196
MGI 1860486
Ensembl ENSMUSG00000035958
Vega OTTMUSG00000000605
Featureprotein-coding
GO_BP
GO_MF
  •   21 Terms
      magnesium ion binding (GO:0000287)
      single-stranded DNA binding (GO:0003697)
      cyclic-nucleotide phosphodiesterase activity (GO:0004112)
      3',5'-cyclic-AMP phosphodiesterase activity (GO:0004115)
      calmodulin-dependent cyclic-nucleotide phosphodiesterase activity (GO:0004117)
      cGMP-stimulated cyclic-nucleotide phosphodiesterase activity (GO:0004118)
      cGMP-inhibited cyclic-nucleotide phosphodiesterase activity (GO:0004119)
      photoreceptor cyclic-nucleotide phosphodiesterase activity (GO:0004120)
      nuclease activity (GO:0004518)
      endonuclease activity (GO:0004519)
      phosphoric diester hydrolase activity (GO:0008081)
      hydrolase activity (GO:0016787)
      manganese ion binding (GO:0030145)
      tyrosyl-RNA phosphodiesterase activity (GO:0036317)
      7,8-dihydro-D-neopterin 2',3'-cyclic phosphate phosphodiesterase activity (GO:0044688)
      metal ion binding (GO:0046872)
      inositol phosphosphingolipid phospholipase activity (GO:0052712)
      inositol phosphorylceramide phospholipase activity (GO:0052713)
      mannosyl-inositol phosphorylceramide phospholipase activity (GO:0052714)
      mannosyl-diinositol phosphorylceramide phospholipase activity (GO:0052715)
      5'-tyrosyl-DNA phosphodiesterase activity (GO:0070260)
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2021104
(v2.0)		Tdp2NM_01955156196
5.1712625.215111.700664.306768.170442.696719.86317.8829455.662643.0331
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2021104
(v2.0)		Tdp256196
720/3680.4544446/3680.1607173/3682.4736366/3681.317521/368-2.0226135/368-2.0339
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2021104
(v2.0)		Tdp256196
364/1540.7245215/1540.3631165/1543.5999347/1542.48418/154-2.077644/154-2.3672
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2021104
(v2.0)		Tdp256196
60.656813644.6
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2021104
(v2.0)		Tdp256196
12.88828115.91
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A