DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2022400
GeneUbr5
SynonymsEdd
Edd1
Descriptionubiquitin protein ligase E3 component n-recognin 5
LocusNM_001081359 UCSC: chr15:37897083-38008609(-) OLP: chr15:37897083-38008609(-)
NM_001112721 UCSC: chr15:37897083-38008609(-) OLP: chr15:37897083-38008609(-)
DB links


Entrez 70790
MGI 1918040
Ensembl ENSMUSG00000037487
Featureprotein-coding
GO_BP
  •   10 Terms
      protein polyubiquitination (GO:0000209)
      DNA repair (GO:0006281)
      cellular response to DNA damage stimulus (GO:0006974)
      positive regulation of protein import into nucleus, translocation (GO:0033160)
      positive regulation of catenin import into nucleus (GO:0035413)
      protein ubiquitination involved in ubiquitin-dependent protein catabolic process (GO:0042787)
      progesterone receptor signaling pathway (GO:0050847)
      positive regulation of canonical Wnt signaling pathway (GO:0090263)
      negative regulation of histone H2A K63-linked ubiquitination (GO:1901315)
      negative regulation of double-strand break repair (GO:2000780)
GO_MF
GO_CC
KEGG
  •   1 Terms
      Ubiquitin mediated proteolysis (mmu04120)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2022400
(v2.0)		Ubr5NM_001081359,NM_00111272170790
17.25818.6924713.31465.076485.1526.683236.813713.38271.730824.099
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2022400
(v2.0)		Ubr570790
725/4360.2204502/4360.087530/4363.84581582/4363.183231/436-1.7241258/436-1.3512
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2022400
(v2.0)		Ubr570790
384/1690.6681236/1690.3637503/1695.07741429/1694.390911/169-1.7932128/169-0.9918
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2022400
(v2.0)		Ubr570790
63.252216438.57
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2022400
(v2.0)		Ubr570790
21.331811917.93
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A