DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2000438
Gene1810009A15Rik
Synonyms
DescriptionRIKEN cDNA 1810009A15 gene
LocusNR_104416 UCSC: chr19:8963373-8965249(+) OLP: chr19:8963373-8965249(+)
NM_025463 UCSC: chr19:8963373-8965249(+) OLP: chr19:8963373-8965249(+)
DB links


Entrez 66276
MGI 1913526
Ensembl ENSMUSG00000071653
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
1.812
SPR
1.58
Oo
1.635
1C
2.146
2C
2.261
4C
2.017
ESC
1.755
MEF
1.685
p1C
2.277
p4C
2.144
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2000438
(v2.0)		1810009A15RikNM_001286103,NM_025463,NR_10441666276
63.853236.976242.1509138.939181.586102.93455.907347.3884188.091138.229
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
-0.137
H3.3
Rep.1
-0.388
H3.3
Rep.2
1.967
H3K4me3
Rep.1
1.038
H3K4me3
Rep.2
-1.696
H3K27me3
Rep.1
-0.976
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2000438
(v2.0)		1810009A15Rik66276
572/441-0.1373365/441-0.3881145/4411.9671361/4411.038332/441-1.696339/441-0.9757
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
-0.123
H3.3
Rep.1
-0.536
H3.3
Rep.2
2.418
H3K4me3
Rep.1
1.731
H3K4me3
Rep.2
-1.76
H3K27me3
Rep.1
-1.919
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2000438
(v2.0)		1810009A15Rik66276
216/165-0.1235123/165-0.536177/1652.4178220/1651.73111/165-1.759565/165-1.9188
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2000438
(v2.0)		1810009A15Rik66276
54.706118429.73
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2000438
(v2.0)		1810009A15Rik66276
18.79489220.43
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0000480
(v1.0)		17764L0013H02-3Mm.2341821810009A15Rik66276
U019131NAP076277-11810009A15Rik;TC932218,TC830646,TC830645,TC830644Q9CSS63.40253.53213.65163.94563.67433.83343.6707
MOE430 N/A
Agilent44K N/A
Proteome N/A