DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2000591
Gene2410089E03Rik
Synonymsb2b012Clo
DescriptionRIKEN cDNA 2410089E03 gene
LocusNM_001162906 UCSC: chr15:8119106-8221158(+) OLP: chr15:8119106-8221158(+)
DB links


Entrez 73692
MGI 1920942
Ensembl ENSMUSG00000039801
Vega OTTMUSG00000022443
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
0.454
SPR
0.847
Oo
1.001
1C
1.122
2C
1.057
4C
0.438
ESC
1.326
MEF
0.926
p1C
1.026
p4C
0.369
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2000591
(v2.0)		2410089E03RikNM_00116290673692
1.845866.025949.0344512.242210.39681.7432320.18427.441499.610671.33732
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.39
H3.3
Rep.1
0.298
H3.3
Rep.2
2.575
H3K4me3
Rep.1
1.55
H3K4me3
Rep.2
-0.443
H3K27me3
Rep.1
-0.422
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2000591
(v2.0)		2410089E03Rik73692
606/3240.3895432/3240.298164/3242.5745379/3241.550157/324-0.4425366/324-0.422
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.587
H3.3
Rep.1
0.226
H3.3
Rep.2
3.573
H3K4me3
Rep.1
2.576
H3K4me3
Rep.2
-0.072
H3K27me3
Rep.1
-0.529
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2000591
(v2.0)		2410089E03Rik73692
320/1490.5867189/1490.2255157/1493.5727358/1492.575834/149-0.0719156/149-0.5288
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2000591
(v2.0)		2410089E03Rik73692
56.488112246.3
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2000591
(v2.0)		2410089E03Rik73692
26.0518929.27
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A