DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2001955
GeneActl6a
SynonymsActl6
ARP4
Baf53a
Descriptionactin-like 6A
LocusNM_019673 UCSC: chr3:32607468-32625893(+) OLP: chr3:32607468-32625893(+)
DB links


Entrez 56456
MGI 1861453
Ensembl ENSMUSG00000027671
Vega OTTMUSG00000021872
Featureprotein-coding
GO_BP
GO_MF
  •   5 Terms
      RNA polymerase II core promoter proximal region sequence-specific DNA binding (GO:0000978)
      RNA polymerase II distal enhancer sequence-specific DNA binding (GO:0000980)
      chromatin binding (GO:0003682)
      protein binding (GO:0005515)
      nucleosomal DNA binding (GO:0031492)
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2001955
(v2.0)		Actl6aNM_01967356456
21.795122.876139.043917.71723.824862.582513.591939.557821.937380.9043
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2001955
(v2.0)		Actl6a56456
596/3610.21410/3610.0672227/3612.8904456/3611.661529/361-1.5477183/361-1.5716
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2001955
(v2.0)		Actl6a56456
328/1700.4331214/1700.2147215/1703.8471423/1702.62868/170-2.216655/170-2.1966
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2001955
(v2.0)		Actl6a56456
61.328216038.33
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2001955
(v2.0)		Actl6a56456
9.1734989.36
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A