DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2002515
GeneAp1b1
SynonymsAdtb1
beta-prime adaptin
Descriptionadaptor protein complex AP-1, beta 1 subunit
LocusNM_001243043 UCSC: chr11:4847524-4942797(+) OLP: chr11:4847524-4942797(+)
NM_001243044 UCSC: chr11:4886827-4942797(+) OLP: chr11:4886827-4942797(+)
NM_007454 UCSC: chr11:4886827-4942797(+) OLP: chr11:4886827-4942797(+)
DB links


Entrez 11764
MGI 1096368
Ensembl ENSMUSG00000009090
Vega OTTMUSG00000005076
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
1.532
SPR
1.825
Oo
1.767
1C
1.553
2C
1.554
4C
1.064
ESC
1.442
MEF
1.809
p1C
1.499
p4C
1.084
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002515
(v2.0)		Ap1b1NM_001243043,NM_001243044,NM_00745411764
33.06365.816257.456834.764334.796610.59626.659863.384330.517411.1323
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
-0.122
H3.3
Rep.1
-0.384
H3.3
Rep.2
2.413
H3K4me3
Rep.1
1.562
H3K4me3
Rep.2
-0.755
H3K27me3
Rep.1
-0.799
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2002515
(v2.0)		Ap1b111764
695/530-0.1216440/530-0.3839237/5302.4134624/5301.562375/530-0.7554461/530-0.7986
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.22
H3.3
Rep.1
0.12
H3.3
Rep.2
3.717
H3K4me3
Rep.1
2.886
H3K4me3
Rep.2
-1.382
H3K27me3
Rep.1
-1.864
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2002515
(v2.0)		Ap1b111764
336/2020.2203238/2020.1198231/2023.7167600/2022.886418/202-1.381983/202-1.8636
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2002515
(v2.0)		Ap1b111764
56.028213840.6
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2002515
(v2.0)		Ap1b111764
12.59259113.84
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0002626
(v1.0)		11732H3122B10-3Mm.29699Ap1b111764
U012278NAP095223-001Ap1b1;TC869179,TC858296O35643U,F3.71593.62383.61063.58053.92423.70963.8689
MOE430 N/A
Agilent44K N/A
Proteome N/A