DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2002744
GeneArl4a
SynonymsArl4
DescriptionADP-ribosylation factor-like 4A
LocusNM_001039515 UCSC: chr12:40759878-40764574(-) OLP: chr12:40759878-40764574(-)
NM_007487 UCSC: chr12:40759878-40763963(-) OLP: chr12:40759878-40763963(-)
DB links


Entrez 11861
MGI 99437
Ensembl ENSMUSG00000047446
Vega OTTMUSG00000032944
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
1.611
SPR
1.306
Oo
1.371
1C
1.393
2C
0.979
4C
1.22
ESC
0.427
MEF
1.285
p1C
1.105
p4C
1.342
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002744
(v2.0)		Arl4aNM_001039515,NM_00748711861
39.823419.232722.499123.72848.5264815.5851.6742218.292111.727120.9615
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.411
H3.3
Rep.1
0.567
H3.3
Rep.2
4.458
H3K4me3
Rep.1
4.051
H3K4me3
Rep.2
-0.43
H3K27me3
Rep.1
-0.742
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2002744
(v2.0)		Arl4a11861
695/3660.4114588/3660.5665684/3664.45832426/3664.050765/366-0.4298331/366-0.7417
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.898
H3.3
Rep.1
0.814
H3.3
Rep.2
5.554
H3K4me3
Rep.1
4.938
H3K4me3
Rep.2
-1.012
H3K27me3
Rep.1
-1.246
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2002744
(v2.0)		Arl4a11861
392/1470.8977281/1470.8143615/1475.55381821/1474.938417/147-1.012393/147-1.2463
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2002744
(v2.0)		Arl4a11861
42.580110042.58
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2002744
(v2.0)		Arl4a11861
15.56827121.93
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A