DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2002905
GeneAtg12
SynonymsApg12l
Descriptionautophagy related 12
LocusNM_026217 UCSC: chr18:46892071-46901233(-) OLP: chr18:46892071-46901233(-)
DB links


Entrez 67526
MGI 1914776
Ensembl ENSMUSG00000032905
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
  •   2 Terms
      Regulation of autophagy (mmu04140)
      RIG-I-like receptor signaling pathway (mmu04622)
Ver2_FPKM
Log10 (FPKM+1)
1.3
SPR
1.932
Oo
1.926
1C
1.714
2C
1.814
4C
1.453
ESC
1.118
MEF
1.86
p1C
1.707
p4C
1.455
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002905
(v2.0)		Atg12NM_02621767526
18.950884.502583.272450.790464.209227.375512.118371.438249.918927.5334
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.412
H3.3
Rep.1
0.257
H3.3
Rep.2
3.293
H3K4me3
Rep.1
2.467
H3K4me3
Rep.2
-0.178
H3K27me3
Rep.1
-0.745
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2002905
(v2.0)		Atg1267526
699/3680.4118477/3680.2574306/3683.2928813/3682.466878/368-0.1782332/368-0.7452
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.726
H3.3
Rep.1
0.39
H3.3
Rep.2
4.389
H3K4me3
Rep.1
3.595
H3K4me3
Rep.2
-0.101
H3K27me3
Rep.1
-0.705
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2002905
(v2.0)		Atg1267526
381/1610.7264229/1610.39298/1614.3893784/1613.594536/161-0.1005149/161-0.7054
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2002905
(v2.0)		Atg1267526
69.325115445.02
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2002905
(v2.0)		Atg1267526
13.02579413.86
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A