DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2003503
GeneBscl2
SynonymsGng3lg
seipin
DescriptionBerardinelli-Seip congenital lipodystrophy 2 homolog (seipin)
LocusNM_001136064 UCSC: chr19:8911957-8923173(+) OLP: chr19:8911957-8923173(+)
NM_008144 UCSC: chr19:8913818-8923173(+) OLP: chr19:8913818-8923173(+)
NM_001290823 UCSC: chr19:8914993-8923173(+) OLP: chr19:8914993-8923173(+)
DB links


Entrez 14705
MGI 1298392
Ensembl ENSMUSG00000071657
Vega OTTMUSG00000034930
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
1.93
SPR
1.992
Oo
1.755
1C
1.034
2C
0.852
4C
1.13
ESC
1.056
MEF
1.808
p1C
1.025
p4C
1.245
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003503
(v2.0)		Bscl2NM_001136064,NM_001290823,NM_00814414705
84.039297.286855.94869.809416.117812.492710.368763.22499.5973516.5961
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
-0.042
H3.3
Rep.1
-0.368
H3.3
Rep.2
1.887
H3K4me3
Rep.1
1.093
H3K4me3
Rep.2
-3.402
H3K27me3
Rep.1
-2.917
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2003503
(v2.0)		Bscl214705
665/480-0.0424403/480-0.3676149/4801.887408/4801.092810/480-3.402195/480-2.9166
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.042
H3.3
Rep.1
-0.401
H3.3
Rep.2
2.708
H3K4me3
Rep.1
1.868
H3K4me3
Rep.2
-3.573
H3K27me3
Rep.1
-2.977
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2003503
(v2.0)		Bscl214705
285/1940.0419159/194-0.4008110/1942.708284/1941.86763/194-3.572836/194-2.9773
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2003503
(v2.0)		Bscl214705
58.89214341.18
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2003503
(v2.0)		Bscl214705
16.34497123.02
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A