DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2003619
GeneC2cd3
Synonyms
DescriptionC2 calcium-dependent domain containing 3
LocusNM_001017985 UCSC: chr7:107520743-107618668(+) OLP: chr7:107520743-107618668(+)
DB links


Entrez 277939
MGI 2142166
Ensembl ENSMUSG00000047248
Vega OTTMUSG00000031837
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
0.762
SPR
1.35
Oo
1.472
1C
1.267
2C
0.801
4C
0.477
ESC
0.799
MEF
1.475
p1C
0.835
p4C
0.486
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003619
(v2.0)		C2cd3NM_001017985277939
4.7847921.385728.657617.48395.318822.001615.299728.88225.846982.0616
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.441
H3.3
Rep.1
0.555
H3.3
Rep.2
5.023
H3K4me3
Rep.1
4.723
H3K4me3
Rep.2
-1.351
H3K27me3
Rep.1
-1.869
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2003619
(v2.0)		C2cd3277939
692/3570.441569/3570.555988/3575.02293773/3574.723233/357-1.3513147/357-1.8687
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.734
H3.3
Rep.1
0.733
H3.3
Rep.2
5.907
H3K4me3
Rep.1
5.358
H3K4me3
Rep.2
-0.818
H3K27me3
Rep.1
-1.618
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2003619
(v2.0)		C2cd3277939
357/1500.7343271/1500.7333801/1505.90752485/1505.358120/150-0.818273/150-1.6183
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2003619
(v2.0)		C2cd3277939
46.24412038.54
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2003619
(v2.0)		C2cd3277939
14.26878716.4
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A