DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2003779
GeneCap1
Synonyms
DescriptionCAP, adenylate cyclase-associated protein 1 (yeast)
LocusNM_007598 UCSC: chr4:122536471-122563124(-) OLP: chr4:122536471-122563124(-)
DB links


Entrez 12331
MGI 88262
Ensembl ENSMUSG00000028656
Vega OTTMUSG00000008872
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
2.206
SPR
0.656
Oo
0.729
1C
1.085
2C
1.32
4C
1.844
ESC
1.472
MEF
0.726
p1C
1.308
p4C
1.871
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003779
(v2.0)		Cap1NM_00759812331
159.6433.529144.3536811.165619.881268.773828.62554.3174319.320573.3397
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
-0.194
H3.3
Rep.1
-0.311
H3.3
Rep.2
2.162
H3K4me3
Rep.1
1.507
H3K4me3
Rep.2
-1.816
H3K27me3
Rep.1
-1.788
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2003779
(v2.0)		Cap112331
580/465-0.1935406/465-0.3112175/4652.1622527/4651.506831/465-1.8162203/465-1.7875
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
-0.11
H3.3
Rep.1
-0.691
H3.3
Rep.2
3.066
H3K4me3
Rep.1
2.384
H3K4me3
Rep.2
-4.795
H3K27me3
Rep.1
-2.832
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2003779
(v2.0)		Cap112331
300/227-0.11152/227-0.6909164/2273.0657475/2272.38361/227-4.79547/227-2.8319
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2003779
(v2.0)		Cap112331
41.90713131.99
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2003779
(v2.0)		Cap112331
7.768928.44
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A