DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2004113
GeneCcnyl1
Synonyms
Descriptioncyclin Y-like 1
LocusNM_001097644 UCSC: chr1:64737919-64772216(+) OLP: chr1:64737919-64772216(+)
DB links


Entrez 227210
MGI 2138614
Ensembl ENSMUSG00000070871
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
1.136
SPR
1.748
Oo
0.984
1C
1.335
2C
1.114
4C
0.942
ESC
1.056
MEF
0.903
p1C
1.111
p4C
0.957
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004113
(v2.0)		Ccnyl1NM_001097644227210
12.676154.9738.644420.618811.98867.7554510.37996.9904711.9198.05638
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.444
H3.3
Rep.1
0.63
H3.3
Rep.2
4.739
H3K4me3
Rep.1
4.088
H3K4me3
Rep.2
1.211
H3K27me3
Rep.1
0.632
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2004113
(v2.0)		Ccnyl1227210
767/3950.4436663/3950.6297895/3954.73912686/3954.0882221/3951.2114928/3950.6316
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.869
H3.3
Rep.1
0.855
H3.3
Rep.2
5.721
H3K4me3
Rep.1
4.922
H3K4me3
Rep.2
1.097
H3K27me3
Rep.1
0.677
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2004113
(v2.0)		Ccnyl1227210
452/1730.869340/1730.8548804/1735.72152113/1734.921690/1731.0966420/1730.6771
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2004113
(v2.0)		Ccnyl1227210
41.958111337.13
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2004113
(v2.0)		Ccnyl1227210
9.82077812.59
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A