DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2004115
GeneCcpg1
SynonymsD9Ertd392e
Descriptioncell cycle progression 1
LocusNM_028181 UCSC: chr9:72833311-72863806(+) OLP: chr9:72833311-72863806(+)
NM_001114328 UCSC: chr9:72833311-72861745(+) OLP: chr9:72833311-72861745(+)
NM_001286545 UCSC: chr9:72833311-72864147(+) OLP: chr9:72833311-72864147(+)
NM_001286544 UCSC: chr9:72833311-72863806(+) OLP: chr9:72833311-72863806(+)
NM_001286546 UCSC: chr9:72833311-72861745(+) OLP: chr9:72833311-72861745(+)
DB links


Entrez 72278
MGI 1196419
Ensembl ENSMUSG00000034563
Vega OTTMUSG00000033538
Featureprotein-coding
GO_BP
  •   5 Terms
      cell cycle (GO:0007049)
      positive regulation of cell proliferation (GO:0008284)
      positive regulation of cell cycle (GO:0045787)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
      regulation of Rho guanyl-nucleotide exchange factor activity (GO:2001106)
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
1.895
SPR
1.018
Oo
0.977
1C
1.765
2C
1.661
4C
1.462
ESC
0.752
MEF
0.906
p1C
1.706
p4C
1.424
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004115
(v2.0)		Ccpg1NM_001114328,NM_001286544,NM_001286545,NM_001286546,NM_02818172278
77.60169.420748.486857.272444.786127.96574.643027.051649.762525.5285
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.205
H3.3
Rep.1
0.111
H3.3
Rep.2
2.246
H3K4me3
Rep.1
1.647
H3K4me3
Rep.2
-1.25
H3K27me3
Rep.1
-1.096
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2004115
(v2.0)		Ccpg172278
645/3920.2051459/3920.1112157/3922.2462490/3921.646939/392-1.2502277/392-1.0961
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.39
H3.3
Rep.1
0.056
H3.3
Rep.2
3.228
H3K4me3
Rep.1
2.641
H3K4me3
Rep.2
-2.411
H3K27me3
Rep.1
-1.882
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2004115
(v2.0)		Ccpg172278
324/1730.3904195/1730.0562142/1733.2285434/1732.64077/173-2.411270/173-1.8821
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2004115
(v2.0)		Ccpg172278
44.037711837.32
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2004115
(v2.0)		Ccpg172278
12.13648414.45
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A